| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_2471 |
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| Symbol | nusB |
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| ID | 3774491 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | + |
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| Start bp | 2552611 |
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| End bp | 2553252 |
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| Gene Length | 642 bp |
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| Protein Length | 213 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637800920 |
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| Product | transcription antitermination protein NusB |
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| Protein accession | YP_401488 |
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| Protein GI | 81301280 |
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| COG category | [K] Transcription |
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| COG ID | [COG0781] Transcription termination factor |
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| TIGRFAM ID | [TIGR01951] transcription antitermination factor NusB |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.526539 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00000000554853 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGCAACCCC GCCGTATTGC TCGTGAACTG GCTTTGCTCA GTTTGAGCCA GCTTCCAGCG
AAAGCCGAGC CACCCTCCGA CCAAATGCTC TCGGAGCTGT TGTTGGCGGC AACCCGCACC
CTCGCCGCAG AAGCCCGCGA TCACCTAGAA GCCGCTTCCG CAGAATTGAA GCAGAGCAGC
GATCGCTTGC TATTGAGCAC CTTGGGCTCT GCCGATCTGG AAAGCTCACG GGCGATGCTC
CAAGAGGTGA TCGAAATGGC CCAGGCTGCA ATTAACCGCA CCGGCAATGC CCTGGACTTG
CCCGAGTGGG TGCAACTAAC CGATCGCGAA GAAGTACGCA AATTTGGCGG CCGGCTAGTG
CTGCAAGTCA GCAACAACCG CGAACGCATC GATCGCACCT TGAATGATGT GATGGTGGAC
TGGCAACTGC ACCGCGTGCC CCGCCTCGAC CAAGACATTT TGCGGTTAGC CGCCGCAGAA
ATTCTGTTCT TAGGTACCCC CGAGCAAGTG GCGATCAACG AAGCAGTGGA ATTGGCCAAC
CGGTACAGTG ATGAAGAAGG TCGCCGCTTC ATCAATGGCG TGTTGCGCCG CCTCAGCACC
ATGCTAGGCA AAGCAGCCCG TGCGGCCCGT CCGTCTTCCT AA
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| Protein sequence | MQPRRIAREL ALLSLSQLPA KAEPPSDQML SELLLAATRT LAAEARDHLE AASAELKQSS
DRLLLSTLGS ADLESSRAML QEVIEMAQAA INRTGNALDL PEWVQLTDRE EVRKFGGRLV
LQVSNNRERI DRTLNDVMVD WQLHRVPRLD QDILRLAAAE ILFLGTPEQV AINEAVELAN
RYSDEEGRRF INGVLRRLST MLGKAARAAR PSS
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