| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_2402 |
|---|
| Symbol | |
|---|
| ID | 3774686 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus elongatus PCC 7942 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007604 |
|---|
| Strand | + |
|---|
| Start bp | 2476025 |
|---|
| End bp | 2477155 |
|---|
| Gene Length | 1131 bp |
|---|
| Protein Length | 376 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637800850 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_401419 |
|---|
| Protein GI | 81301211 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2957] Peptidylarginine deiminase and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.00162245 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.000927611 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGAGGGGGG ATTTCGCACC GAACGACCGT ACCCAAACAA CCGAAGCCGC TAGGCTGAAC
AAGGGTCTTT TTGCTAGTCA AATCATGAGT CAGGGGCAAC AGAGCGATCG CCGTTTTCCA
GCGGAATGGG AAGCGCAGGA CGGTGTTTTG ATTGCTTGGC CCCATGCGGA CAGTGATTGG
CGATCGCTGT TGGATCAGGT CGATCGCGTC TACCGTGACC TAGCGGAAGC AGTGACGCGC
TTTGAGCAGT TGCTGATCGT GACGCCAGAG CCCGATCGCG TGGCAGAACA ACTGGCGCAG
ACCACTGCGA ATTGCGATCG CATTCAGATT GTTGAACTGC CCACCAATGA CACTTGGAGC
CGCGATTTTG GGCCGCTGAC GGTGGAAACC CCAGCAGGGC TGCGACTGCT GGATTGGGGC
TTCAATGGCT GGGGCCTAAA GTTTGCCGCC AACCACGACA ACCAAGTGAC ACGGCGACTT
TGGCAGCAAG GAATTTTTGG CACCACGCCG CTGGAAACTG TGCCGCTGAT TTTTGAAGGG
GGCAGTATCG AAAGTGATGG ACGCGGCACC CTACTCACCA CGAGTCAGTG TTTGCTGGAA
GCGAATCGTA ATCCGGGCTT GAGCCGCGAG GCGATCGCGC AGATCATCCA GCGACAACTG
GGGGGCGATC GCCTGCTCTG GTTGGAGCAT GGCCATTTGG AAGGCGATGA CACGGACGCC
CACATCGACA CGCTGGTGCG GATCGCACCT AATGACACGC TGATTTACGT TGCCTGCGAC
GATCCCAGTG ACAGTCATGC GGCAGAACTA ACAGCCCTTG AAGCAGAACT CAAAGCCTTG
CGCGCGGCGG ACGGACAGCC CTACCACTTG ATTCCCTTGC CTTGGCCGCA ACCCTGCTTC
GATGCGGATG GTCAGCGCTT GCCGACAACC TACGCCAATT ACTTAGTCAT CAATGGCGCA
GTCTTAGTAC CGACTTACAA CGATCCGGCA GATGAGGCGG CGATCGCGGC AATCGCCGCT
GCTTTCCCCG ATCGCCTCGC GATCGGCATC AACTGTCGGC CACTCCTGGA GCAACATGGC
TCACTGCATT GCATCACGAT GCAACTGCCT GCTGGACTTC TCAGTCGCTA A
|
|---|
| Protein sequence | MRGDFAPNDR TQTTEAARLN KGLFASQIMS QGQQSDRRFP AEWEAQDGVL IAWPHADSDW
RSLLDQVDRV YRDLAEAVTR FEQLLIVTPE PDRVAEQLAQ TTANCDRIQI VELPTNDTWS
RDFGPLTVET PAGLRLLDWG FNGWGLKFAA NHDNQVTRRL WQQGIFGTTP LETVPLIFEG
GSIESDGRGT LLTTSQCLLE ANRNPGLSRE AIAQIIQRQL GGDRLLWLEH GHLEGDDTDA
HIDTLVRIAP NDTLIYVACD DPSDSHAAEL TALEAELKAL RAADGQPYHL IPLPWPQPCF
DADGQRLPTT YANYLVINGA VLVPTYNDPA DEAAIAAIAA AFPDRLAIGI NCRPLLEQHG
SLHCITMQLP AGLLSR
|
|---|
| |