Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_2392 |
Symbol | |
ID | 3774676 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 2466045 |
End bp | 2467505 |
Gene Length | 1461 bp |
Protein Length | 486 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 637800840 |
Product | hypothetical protein |
Protein accession | YP_401409 |
Protein GI | 81301201 |
COG category | [S] Function unknown |
COG ID | [COG4938] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0546417 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.00518189 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGTGACA AAACTAAAGA ATTAAGGAAT AAATACAATT CCAAAAATCG CCACAAGAAC TTTGGGCCTT GCCTTAGAAA GGTACATATT GAGGGCTTTC GAGGAGTTCA GTCGGCTGAT CTTGAACTTG AATTCCCCAT AACTGCTATT TCTGGGCTTA ATGGATCGGG GAAGAGTACT GTTGGTCAAC TAGCAATTTG TGCATATAAG AAGCCAGATA AATCTATGAC CTACAAAAGG CTTTATATTA AGGATTTTTT TCCAGTTTCT CCAGCTGATC CAAAACCAAT ATCTGACAGT GCAAAAGTAG TTTATTTCTA CGAGACTGAC GATTACCAAA AGCCTAAGGA AGTTACAGTA TCCCGAGTAA AATCATCTTG GTCGGGCTAT AAAAGACAGC CTGAAAGGTA TTGTTACTAT ATCGGATTTA CCGTTTATTT GCCAAAAGTA GAACGTAGAG ATTTAAGTGT TTATGCAGGC GTCAATCTTC AATTTACTGA AAAACGAGAT ATTGAAGCAG AAGTTGTAAA AAAAATGGCC AGAATCATAG GTCATAAATA TGAAAATGTA GCATTCCAAG GAGTATCCCA CAACGGTAAA GAGTCAGAAG TAGGTATAGC TTACAGACTT GGATATTCTT ACTCAGAAAA TAATATGGGT TTTGGCGAAG GACGTATTCT ATATACTATA GATAAGCTTG AGAGTTCGCC AGAGCAAAGT CTTTTTATCC TTGAAGAGCC AGAAACCTCA CTTCATGAAA GCGCTCAGCA TGAATTTGCA AAGTATCTTC TGGACGTATG TAATAGGCGA CATCATCAAA TAATACTTTC AACTCATTCT AGTGTGATTG TTAATGCTCT ACCTCCTGAG TCGAGAAAAT TGATGATCAG AGATGAGGGT GGCGTTGATA TTAGAAACAA GATTTCCTCA GGTCAATTAC GATCTATCTT GTCTTCTGGT CACGTGCGAT CACTGGATAT ATGTGTCGAA GATAATTTTG CAAAGGTTTT ATTGATAGAA GTTATACGCA TGAAACGAAA AGCTCTGCTC AAAATAGTAG AAATTCATGC TATTGGAAGC ACAGATGCAG TTCGCGAAGC TGTACGTATT CTTAAAAAAA CAGGAAAGAA AGCAATTGCT GTTAGAGATG CAGATATTGG GCCTTCAGAG AAAGAAGGCT TATATTCCTT TCCAGGTAAT AAGCCTCCGG AAAAAGAGGT TTTTGAGCAT TCTGCGGTTA AGGCCTTTTT TAAGTCAAAG TATGATTTAG ATGTTGAATG GTTTTTTCAA TATAAGAACG TTTCTGATCA TCATTACTAT GCTAAGTGTA TTGCTTCTGA AATTGCTTCA GATGAGAGTG TAATTCAGAC TTCAGCGATT GAAGAGTATC TTAAACATGT CAATAACAAT TTTGATTATT TGATTGATGC TATTGAAAAG GAATTAGACA ATCACAATTA A
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Protein sequence | MSDKTKELRN KYNSKNRHKN FGPCLRKVHI EGFRGVQSAD LELEFPITAI SGLNGSGKST VGQLAICAYK KPDKSMTYKR LYIKDFFPVS PADPKPISDS AKVVYFYETD DYQKPKEVTV SRVKSSWSGY KRQPERYCYY IGFTVYLPKV ERRDLSVYAG VNLQFTEKRD IEAEVVKKMA RIIGHKYENV AFQGVSHNGK ESEVGIAYRL GYSYSENNMG FGEGRILYTI DKLESSPEQS LFILEEPETS LHESAQHEFA KYLLDVCNRR HHQIILSTHS SVIVNALPPE SRKLMIRDEG GVDIRNKISS GQLRSILSSG HVRSLDICVE DNFAKVLLIE VIRMKRKALL KIVEIHAIGS TDAVREAVRI LKKTGKKAIA VRDADIGPSE KEGLYSFPGN KPPEKEVFEH SAVKAFFKSK YDLDVEWFFQ YKNVSDHHYY AKCIASEIAS DESVIQTSAI EEYLKHVNNN FDYLIDAIEK ELDNHN
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