| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_2325 |
|---|
| Symbol | |
|---|
| ID | 3774608 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus elongatus PCC 7942 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007604 |
|---|
| Strand | - |
|---|
| Start bp | 2392327 |
|---|
| End bp | 2393094 |
|---|
| Gene Length | 768 bp |
|---|
| Protein Length | 255 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637800773 |
|---|
| Product | HEAT repeat-containing PBS lyase |
|---|
| Protein accession | YP_401342 |
|---|
| Protein GI | 81301134 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1413] FOG: HEAT repeat |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 45 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCATCTG CGATCGCTAA GTTGTCTGCC GCACCAGCAA GTGTCACCCC CTGCGGTAGC
GTAAAGGACG AAAGGCTTAG CTGCGCCAGC ATGGACTTAG GACAAATCGA AGCAAAGCTG
CGGAGCAGTG ACGTCCAAGA GCGGATTCGG GCGATGACAG CGCTGCGAGC GTACGCACCG
GCTGTGGCGG TGCCGCTGTT GCGAGGCTGC AGCCAAGACC CTGAATTTGT GGTGCGATCG
CTGGCGGCTA TGACCTTGGG CCACAAGCGC ACGCCTGAGA GTTTTGCCCT TTTGCAAGGA
CTGCTGCACG ATGACGCCGA CGCCAATGTG CGGGCTGAGT CGGCTAATGC GATCGCGGCG
TTTGGCGAGA CTGCGCTACC AGACCTGATG CGATCGTTTC GGGAGGATCA GCATTGGCTG
GTGCGCTTGA GTATTTTGGC GGCGTTGCAG GCGCTCAATC AGCCGCAGAT CCTGTTTGAT
AGCGCGGTTT TGGCGATCGC GGATACTGAC CTCAGCGTCC GGGAAGCGGC GATCGATCTA
CTGGCAACCT TTGCAGGCAG CCCGATGCAG ACCTTTGCCC TCGACAAACT GCTGCCGTTG
GCGCGATCGG AACATTGGCA GCTACGGGCT CATCTGGCGC GAGCGCTGCA CTGTTTCGAC
CAGCACCAAG CCCGTGAAAC GCTGCAAGTC CTGCGGCAGG ACGACAACCA TCACGTGGTA
GCTGCCGTCC TTGAGGGTTC AGTGCGGCCT AGCCCTAGCC TTGGTTAA
|
|---|
| Protein sequence | MASAIAKLSA APASVTPCGS VKDERLSCAS MDLGQIEAKL RSSDVQERIR AMTALRAYAP
AVAVPLLRGC SQDPEFVVRS LAAMTLGHKR TPESFALLQG LLHDDADANV RAESANAIAA
FGETALPDLM RSFREDQHWL VRLSILAALQ ALNQPQILFD SAVLAIADTD LSVREAAIDL
LATFAGSPMQ TFALDKLLPL ARSEHWQLRA HLARALHCFD QHQARETLQV LRQDDNHHVV
AAVLEGSVRP SPSLG
|
|---|
| |