Gene Synpcc7942_2321 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2321 
Symbol 
ID3774604 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2390121 
End bp2390642 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content52% 
IMG OID637800769 
Productphotosystem I assembly protein Ycf3 
Protein accessionYP_401338 
Protein GI81301130 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAGAA CACAGCGCAA CGACAACTTC ATCGACAAGT CTTTTACGGT GATGGCAGAC 
CTGATTCTCA AGGTGTTGCC GACCAACAAG AAGTCTAAGG AAGCGTTTGC CTACTATCGC
GATGGTATGT CGGCGCAGGC CGATGGCGAA TACGCCGAAG CGCTGGAGAA CTATCAAGAG
GCGCTGACGC TGGAAGAAGA TCCGATCGAT CGCAGCTTCA TCCTCTACAA CATTGCACTG
GTACACACCA GCAACGGTGA TCACCAAACG GCGCTGGATC ATTACCTGCA GGCCTTGGAT
CTGAATCCGA AAATGCCGCA GGCACTCAAC AATATTGCGG TGATTCACCA CTTCCTCGGT
CAGCGATCGG AGGAAGCAGG CAACGATGAT GAAGCCGAAC GCCACTACGA TCAAGCGGCA
GAATATTGGA CCCAAGCGAT TCGCCTCGCG CCCAACAACT ACATCGAGGC TCAGAACTGG
CTGAAAACAA CTGGCCGTTC TAAAGTTGAC GTTTACTTCT AG
 
Protein sequence
MPRTQRNDNF IDKSFTVMAD LILKVLPTNK KSKEAFAYYR DGMSAQADGE YAEALENYQE 
ALTLEEDPID RSFILYNIAL VHTSNGDHQT ALDHYLQALD LNPKMPQALN NIAVIHHFLG
QRSEEAGNDD EAERHYDQAA EYWTQAIRLA PNNYIEAQNW LKTTGRSKVD VYF