Gene Synpcc7942_2315 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2315 
Symbol 
ID3774598 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2383870 
End bp2385324 
Gene Length1455 bp 
Protein Length484 aa 
Translation table11 
GC content57% 
IMG OID637800763 
ProductF0F1 ATP synthase subunit beta 
Protein accessionYP_401332 
Protein GI81301124 
COG category[C] Energy production and conversion 
COG ID[COG0055] F0F1-type ATP synthase, beta subunit 
TIGRFAM ID[TIGR01039] ATP synthase, F1 beta subunit 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.924902 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCACCA CTACTGAGAA GACAAATATT GGCTACATCC GGCAGGTCAT CGGCCCTGTC 
GTCGACGTAG AGTTCCCTGC GGGCAAATTG CCGCAGATCT ACAACGCGCT TGTCATCAAG
GGCAAAAACG AAGCCGGTCA AGACCTGTCG GTGACCTGTG AAGTGCAACA GCTTCTGGGC
GATCGCAAGG TTCGTGCCGT TTCGATGAGC ACGACTGACG GGTTGGTTCG TGGTTTGGAA
GTCATCGACA CTGGCGCTCC GATCAGCGTG CCGGTCGGTG AAGCCACCCT CGGCCGTATC
TTCAACGTCC TCGGCGAACC GGTGGACGAA CTGGGCCCGG TCAACGCTGC GACAACCTCG
CCGATTCACC GCGATGCTCC GAAACTGACG GACTTGGAGA CCAAGCCCAA AGTTTTTGAA
ACCGGCATTA AGGTCATCGA CTTGCTGGCT CCCTATCGTC AGGGCGGCAA AATCGGCCTG
TTCGGCGGTG CCGGTGTTGG CAAAACCGTC TTGATCCAAG AGCTGATCAA CAACATTGCG
AAAGAACACG GCGGTGTGTC GGTGTTCGGC GGCGTGGGTG AACGCACCCG CGAAGGCAAT
GACCTCTACC AAGAGTTCAA AGAGTCGGGC GTTATCGACG AGAAAAATAT CGCCAACTCG
AAAGTGGCCT TGGTCTATGG TCAGATGAAC GAGCCGCCCG GGGCACGGAT GCGTGTCGGT
CTGTCGGCGT TGACCATGGC GGAGCACTTC CGCGACGTCA ACAAGCAAGA CGTGTTGCTG
TTCATCGACA ACATCTTCCG CTTCGTGCAA GCCGGTTCGG AAGTGTCGGC ACTACTAGGG
CGGATGCCTT CTGCGGTGGG CTATCAACCG ACCTTGGGCA CCGACGTTGG TCAGCTGCAA
GAGCGGATCA CCTCAACCCT TGAAGGTTCC ATCACCTCGA TCCAAGCGGT CTACGTTCCT
GCGGACGACT TGACTGACCC GGCACCAGCT ACCACCTTTG CCCACTTGGA CGCAACCACT
GTGTTGTCTC GGGGTCTGGC TTCGAAAGGG ATCTATCCGG CGGTTGACCC GTTGGATTCG
ACCTCGACGA TGCTGCAACC CTCGATCGTG GGTGAAGAGC ACTACCGGAC GGCGCGTGCG
GTGCAGTCGA CCCTGCAACG CTACAAAGAG CTGCAAGACA TCATCGCGAT CTTGGGCTTG
GATGAGCTGT CGGAAGAAGA CCGTCAGACC GTGGCACGGG CTCGTAAGAT CGAGAAGTTC
CTGTCGCAAC CCTTCTTCGT GGCTGAAGTG TTTACCGGTT CGCCTGGTAA GTACGTGAAG
CTGGAAGACA CGATCAGTGG CTTCAACCGC ATCCTCAACG GCGAGTTGGA TGACCTGCCG
GAGCAAGCCT TCTACTTGGT GGGCGATATC CAAGAAGCCA TCGAAAAAGG CGCCAAGCTG
AAAGCTGAAT CCTAG
 
Protein sequence
MVTTTEKTNI GYIRQVIGPV VDVEFPAGKL PQIYNALVIK GKNEAGQDLS VTCEVQQLLG 
DRKVRAVSMS TTDGLVRGLE VIDTGAPISV PVGEATLGRI FNVLGEPVDE LGPVNAATTS
PIHRDAPKLT DLETKPKVFE TGIKVIDLLA PYRQGGKIGL FGGAGVGKTV LIQELINNIA
KEHGGVSVFG GVGERTREGN DLYQEFKESG VIDEKNIANS KVALVYGQMN EPPGARMRVG
LSALTMAEHF RDVNKQDVLL FIDNIFRFVQ AGSEVSALLG RMPSAVGYQP TLGTDVGQLQ
ERITSTLEGS ITSIQAVYVP ADDLTDPAPA TTFAHLDATT VLSRGLASKG IYPAVDPLDS
TSTMLQPSIV GEEHYRTARA VQSTLQRYKE LQDIIAILGL DELSEEDRQT VARARKIEKF
LSQPFFVAEV FTGSPGKYVK LEDTISGFNR ILNGELDDLP EQAFYLVGDI QEAIEKGAKL
KAES