Gene Synpcc7942_2248 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2248 
Symbol 
ID3773904 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2315452 
End bp2315727 
Gene Length276 bp 
Protein Length91 aa 
Translation table11 
GC content51% 
IMG OID637800695 
Productnucleoid protein Hbs 
Protein accessionYP_401265 
Protein GI81301057 
COG category[L] Replication, recombination and repair 
COG ID[COG0776] Bacterial nucleoid DNA-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0990789 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAAGG GTGAACTCAT CGATCAGGTG GCAGTACGGA CTGGCCTGAC TAAAGTGCAA 
GTTGCTGCCG CGATTGATGC TTTGGTCGAC GTTATTGTCG ATACCGTAGT CGAAGGTGAA
AAAGTGTCCA TTCTGGGCTT TGGAGCCTTC GAAGCGCGCG AGCGCTCCGA GCGTCAGGGC
CTCAATCCCA AAACTGGCGA CAAAATCTTG ATCCCTGCTA AAAAAGTTCC TGCTTTCACT
GCTGGCAAGC TTTTCAAAGA TCGCGTCCAA GGCTAA
 
Protein sequence
MNKGELIDQV AVRTGLTKVQ VAAAIDALVD VIVDTVVEGE KVSILGFGAF EARERSERQG 
LNPKTGDKIL IPAKKVPAFT AGKLFKDRVQ G