Gene Synpcc7942_2094 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2094 
Symbol 
ID3774313 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2176209 
End bp2176610 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content50% 
IMG OID637800539 
ProductBeta-Ig-H3/fasciclin 
Protein accessionYP_401111 
Protein GI81300903 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2335] Secreted and surface protein containing fasciclin-like repeats 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.679914 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAAAA TCCTTGAGGT TGCCCGCGAG GCGGGTTGTT TTCAGACGCT ACTCACAGCC 
GTTGAAGTCG CTGGCTTAGT CGATGCACTC AATAGCGACG GTCCTTTTAC CGTCTTTGCA
CCTACCGATG ATGCTTTTGC TGCACTACCA CCGGGCACAG TGACAACGCT GGTTCAGAAC
CCGCCGCAAC TAGCTCGAAT TCTCAAGTTT CACGTTACGG CAGGTGCTCT ATCCAAAGCA
GACCTGATCG ATCGCCCGTC AGTTGATTCG TTAGAAGGCG CACCAATTCC CATTGGACGA
GCAGAGCCGT TTGAAATCAA AAATGCGACA GTTTTGTCTG CTGATATTGC CTGTGATAAC
GGCATTGTTC ATGTCTTGAA TCGCGTCATT TTAATGGGCT AA
 
Protein sequence
MAKILEVARE AGCFQTLLTA VEVAGLVDAL NSDGPFTVFA PTDDAFAALP PGTVTTLVQN 
PPQLARILKF HVTAGALSKA DLIDRPSVDS LEGAPIPIGR AEPFEIKNAT VLSADIACDN
GIVHVLNRVI LMG