Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_2094 |
Symbol | |
ID | 3774313 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 2176209 |
End bp | 2176610 |
Gene Length | 402 bp |
Protein Length | 133 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637800539 |
Product | Beta-Ig-H3/fasciclin |
Protein accession | YP_401111 |
Protein GI | 81300903 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2335] Secreted and surface protein containing fasciclin-like repeats |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.679914 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCAAAA TCCTTGAGGT TGCCCGCGAG GCGGGTTGTT TTCAGACGCT ACTCACAGCC GTTGAAGTCG CTGGCTTAGT CGATGCACTC AATAGCGACG GTCCTTTTAC CGTCTTTGCA CCTACCGATG ATGCTTTTGC TGCACTACCA CCGGGCACAG TGACAACGCT GGTTCAGAAC CCGCCGCAAC TAGCTCGAAT TCTCAAGTTT CACGTTACGG CAGGTGCTCT ATCCAAAGCA GACCTGATCG ATCGCCCGTC AGTTGATTCG TTAGAAGGCG CACCAATTCC CATTGGACGA GCAGAGCCGT TTGAAATCAA AAATGCGACA GTTTTGTCTG CTGATATTGC CTGTGATAAC GGCATTGTTC ATGTCTTGAA TCGCGTCATT TTAATGGGCT AA
|
Protein sequence | MAKILEVARE AGCFQTLLTA VEVAGLVDAL NSDGPFTVFA PTDDAFAALP PGTVTTLVQN PPQLARILKF HVTAGALSKA DLIDRPSVDS LEGAPIPIGR AEPFEIKNAT VLSADIACDN GIVHVLNRVI LMG
|
| |