| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_2070 |
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| Symbol | |
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| ID | 3774289 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | - |
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| Start bp | 2146366 |
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| End bp | 2147454 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637800515 |
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| Product | twitching motility protein |
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| Protein accession | YP_401087 |
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| Protein GI | 81300879 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
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| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGCTGA TGATTGAAGA CCTGATGGAA AAGCTGGTGG AGATGGGTGG ATCTGACCTT
CACCTTTCCG TTGGTCTGCC GCCCTATTTT CGAATTAGTG GCAAACTGAC ACCGATCGGC
GATGAGCCGA TGGGCGAAGA ACAGTGCCAA CGCCTGATTT TCAGCATGTT GAACAACACG
CAACGCAAAA TGCTGGAGCA GAACTGGGAG TTAGACTGCT CCTACGGCAT CCGTGGTCTA
GCTCGGTTTC GGGTCAACGT CTATAAAGAC AAGGGAACCT ATGCGGCCTG TTTGCGGGCA
CTCAGTGCCA AGGTCCCAGA GTTTAACGAT CTCGGCCTGC CACAGGTTGT CCGGGAAATG
AGCGAGAAAC CGCGAGGGCT GATCCTAGTG ACAGGGCCCA CGGGTTCAGG CAAGACCACA
ACTTTGGCTG CAGTGATTGA ACTAATCAAT CGCAGCCGTG CTGAACATAT CATCACGGTT
GAAGACCCAA TTGAGTTTGT CTATCAACCG GCAAAAAGTA TCATCCACCA GCGTCAGCTG
GGTGAGGATA CCAAGAGTTT TGCCAACGCG CTGCGAGCTG CCCTGCGGGA AGACCCTGAC
ATTATCCTCG TGGGTGAGAT GCGGGACTTG GAAACGATCC AGTTGGCAAT CACTGCTGCA
GAGACCGGCC ACCTTGTCTT TGGTACCTTA CACACCAGCT CTGCAGCCCA AACCGTTGAC
CGGATTATTG ACGTTTTCCC GGCTGAAAAA CAGACACAGG TGCGGGTGCA ACTCTCGAAC
TCTCTGATTG CAGTTTTTAG TCAGACCCTA GTACAGAAAC GCAATGCTCG TCCGGGCAGT
TTTGGCCGAG TCTTGGCTCA GGAAATTATG ATTGTGACGC CGGCAATCTC GAACTTGATT
CGGGAAGGGA AAACGGCGCA GATCTATTCC CAAATTCAGA CGGGTGGCAA GTTGGGAATG
CAGACGCTCG AAAAAGCGCT GGCAGACCTC TACAAAGCAG GTGAAATTAC CTTTGAAGCA
GCTGCATCCA AAACGTCGAA GCCTGACGAG ATGCAACGAC TCATCGGTAA TGTTCCGGTT
GCTGCATAG
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| Protein sequence | MELMIEDLME KLVEMGGSDL HLSVGLPPYF RISGKLTPIG DEPMGEEQCQ RLIFSMLNNT
QRKMLEQNWE LDCSYGIRGL ARFRVNVYKD KGTYAACLRA LSAKVPEFND LGLPQVVREM
SEKPRGLILV TGPTGSGKTT TLAAVIELIN RSRAEHIITV EDPIEFVYQP AKSIIHQRQL
GEDTKSFANA LRAALREDPD IILVGEMRDL ETIQLAITAA ETGHLVFGTL HTSSAAQTVD
RIIDVFPAEK QTQVRVQLSN SLIAVFSQTL VQKRNARPGS FGRVLAQEIM IVTPAISNLI
REGKTAQIYS QIQTGGKLGM QTLEKALADL YKAGEITFEA AASKTSKPDE MQRLIGNVPV
AA
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