Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_2060 |
Symbol | |
ID | 3774279 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 2137504 |
End bp | 2138169 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637800505 |
Product | hypothetical protein |
Protein accession | YP_401077 |
Protein GI | 81300869 |
COG category | [R] General function prediction only |
COG ID | [COG0325] Predicted enzyme with a TIM-barrel fold |
TIGRFAM ID | [TIGR00044] pyridoxal phosphate enzyme, YggS family |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.746586 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCCAAA TTGCCGAGCG GTTGGCCAGT CTCCGATCGC AACTGCCTCC CAGCGTTCAG CTGATTGCTG TCAGCAAGAA CCATCCCGCT GCTGCCATCC GAGAAGCCTA TGCAGCAGGT CAGCGGCACT TTGGCGAAAA TCGGGTCCAA GAAGCGATCG CTAAGCAAGC GGAACTGACG GATCTGCCCG ATTTGACTTG GCATCTGCTG GGAAAACTGC AGAGCAATAA AGCCCGGAAA GCTGTCGAGC ATTTCGACTG GATTCATTCA GTTGATAGCT GGGCCTTGGC TGAACGACTC GATCGCATTG CGGGAGAGTT GGGGCGATCG CCCAAGCTTT GCCTCCAGGT GAAGCTCCTG CCTGACCCCA ACAAAGCGGG CTGGGACCCT GCTGATTTGC GGGCTGAGTT ACCGCAGCTC AGTCAACTCC AACAGGTACA AATCCGCGGC TTGATGGTGA TTGCGCCCCT CGGACTCACC GCCGCTGAGA CTCAGGCTCT GTTTGCGCAG GCTCGCACCT TCGCCGCCGA GTTGCAGCAG CAGGCTCCGC AGCTACGGCT CACGGAACTC TCGATGGGCA TGTCGAGTGA CTGGCCTTTG GCTGTGGCGG AAGGGGCAAC TTGGATTCGA GTCGGAACCC AGTTATTTGG GCCGCGATCG CTGTAA
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Protein sequence | MAQIAERLAS LRSQLPPSVQ LIAVSKNHPA AAIREAYAAG QRHFGENRVQ EAIAKQAELT DLPDLTWHLL GKLQSNKARK AVEHFDWIHS VDSWALAERL DRIAGELGRS PKLCLQVKLL PDPNKAGWDP ADLRAELPQL SQLQQVQIRG LMVIAPLGLT AAETQALFAQ ARTFAAELQQ QAPQLRLTEL SMGMSSDWPL AVAEGATWIR VGTQLFGPRS L
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