| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_2045 |
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| Symbol | |
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| ID | 3774264 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | - |
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| Start bp | 2114134 |
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| End bp | 2117721 |
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| Gene Length | 3588 bp |
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| Protein Length | 1195 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637800490 |
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| Product | condensin subunit Smc |
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| Protein accession | YP_401062 |
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| Protein GI | 81300854 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG1196] Chromosome segregation ATPases |
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| TIGRFAM ID | [TIGR02169] chromosome segregation protein SMC, primarily archaeal type |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.265343 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGTCTACA TCAAACAGAT CGAGCTGAGC CATTTCAAGT CCTTCGGGGG CACTACCTCG
CTGCCGCTGC TGCCGGAATT TACGGTGGTG ACGGGGCCAA ATGGTTCTGG GAAATCCAAC
ATCCTTGATG CGCTGCTGTT TGCCCTAGGA CTCTCGAGTT CCAAGGGAAT GCGGGCCGAT
CGCCTGCCGG ATTTGGTCAA TTCCACCTAC GCCAGTCGCA GCCGCAGCAC GGTCGAAACG
CTGGTCACGG TCACCTTTGC CCTCGATGAC TGGCAGCCCG AAGCCGAAGA GACAGAGGAG
GGCGAGGGCA CCGGCCTACA ACCGGGGATG GCGGAGTGGA CGGTCAGCCG CAAGCTGCGA
GTGACGCCTT CTGGCACCTA CACCAGCACC TATGCCATGA ATGGCGAGGC CTGCACGCTG
CAGCAACTGC ATGAGCAACT AAGTCGGCTG CGGATTTATC CCGAGGGCTA CAACGTGGTC
CTGCAGGGGG ATGTGACCAA CATCATTTCG ATGAGTCCCC GCGATCGCCG CCAAATTATT
GATGAGCTGG CGGGGGTCGC CCAATTCGAT CGCAAGATTG AGCAAGCTAA GGGCAAGCTA
GAGGCGGTCA AGGAGCGGGA AGATCGCTGC CGCATTGTCG AACAGGAGTT GATCGAACAG
CGCGATCGCT TGGCTAAGGA TCGAGAAAAA GCCCAGAAAT ATCAAGCGCT GCGTCAAGAG
CAGGCGACCA AGCAAAGTTG GGAGGCGGTC TTGCGCTGGC GGGCTGGGCA GCGGCAAGTT
CAAGCGCTGC AGCGATCGCT GGCCCAACTG GCGACGGATG CGGCGACCGA TCAACAGACG
CAGCAGACGC TCGAGCAACA AATTCAGCAA ACTGAGGCCA CCCTCGACCG CCTCAATCAG
CGGGTCAAGG CGCTGGGAGA GGAAGAACTG CTGAAACTGC AAGCGGCGCT GGCTCAGCAA
GAGGCTGAAC AGCGGCAGAG TCAGCGGCAG CAACAGGAAC TAGTCGAGTC ACAAACCCAG
ACGCAGCAGC AGATTCAGGC GTTGCTGCAA ACTCAAGCTC AGTTGCAGAC GGAAGGGCAA
CAGCAGGCGG AGCAGGCCCG AACCTTACAG ACAACGATCG CCCAGACTTT ACAGCCGCAA
TATCAGCAAG CACTAGAACA AGTCGAAGCG GCCCGGCAGT CGGCCCATGC CCTCGCCGCC
CAATCCCAAG ATTGGGTGAC GCGCCAAACG AGTCTGCGAC AACAGGCTGA TGCGATCGCG
GCTCAAGTGG AACCGCAGCG AGCAGAACAA GCCCAACTAC AAGAGCGCCA AACGCAGCTC
CAGCAGCAAT TGGAGGCAAC CCAATCGGCC TTAGTAACGG TGACAGCCGA GCTGGAGACG
GAGACAGAAC AGGCGGAAGG CGATCGCGCC GCTCTCAGCC AAGCGGAAGC GGCGGTGGTC
ACGGCAGCAG ATCAGCTTGT GCGGCTGGAA GAAGAACTGC AGATCCAGCA GGAAACCCGC
GATCGCCTGC TCAAAGAACA ACGAGACAAG CAGCGCCAGC TCGATCGCCA AGAGAGTTTG
CGTCAAGCGA TGCAGGAAAC CCAGGGGACA GCGGCGGCGC GGCTGATTCT CGATACTGGC
CTGCCCGGAG TGCATGGTCT AGTGGCGCAA CTGGGACGGG TGGAACCCCG CTATCAACTG
GCGCTAGAAG TGGCCGCCGG TGGACGGCTG GGCTATCTGG TTGTCGATGA TGATGGCGTC
GCCTCGGCGG GAATTGAGCT GCTCAAACAG AAGAAAGCGG GGCGAATCAC GTTCCTACCC
CTCAACCGGA TTCGTGCGGG CAAACAGCCA GAAATTCCGC GTTGGCAGCA GCCGGAAGGG
TTGGTCGATC TTGCGATCGC CCTAGTCGAC TGCGACGATC GCTACCGCGA AGTCTTCAAA
TTTGTCCTTG GCGGCACTGT CGTCTTTGAA CGGCTTGATC AAGCCCGTCG CTACATGGGG
CAGTACCGCA TCGTTACCCT CGATGGTGAG CTGCTGGAAA CCAGTGGGGC GATGACCGGC
GGTAGCATCG CTCGGCGATC AGGCGGCCTC AGCTTCGGTA GTCCCGACAG TGGCGAATCG
GCGGAAGTGC GAGCAATTCG CGATCGCCTC GAACAACTCG AAGTCATCCT CGATCGCAGT
GAGTTGCAAA TCCTCAATCT GCAAGCGGCG ATTAAAGATG CAGCCAGTAC GCTCAGCGAT
CGCCGCCAAC AACAGCGCGA GCAGCAACTG ACGGTTCAAC AACGTCAGCA AACCCTGCAG
CGCCTGCAGC AACAACAGCA ACAGCTCAAC GCTGAACTGC AGCAACGCCA ACAGCAAGCC
AGTCAAGCGC AAGCACGGCT GGCAGCCTTG GCTTTGGAAT TGCCCGCCGC ACTGAAACAG
CTGAAAACAC TCCGCCAAGC CCTTGCGGAA CTAGAAGATT CTCCGATTCA TGGTGAGTGG
CAGCAGCGGC AAACGCTTCT ACAACAGCAA GAAGCCCTGC TCCAGCAACA GGAAACTGCC
CTGCGGCAAG CCGAGCAACA GCTGCAGCAA TTGCAGACTG ATCAAAAACG CCTGCAGGAA
CGCGCGATCG CAGCTCAAAC CCAAGTCAGC CAGCTCCGGC AACAGCAGGG GGAACAGCTC
AATCGTCTGG CTCAGCTCGA TGAACAGCAA CGCCAACAGG CGACGGCGAT CGCCCAACTG
CAGCAACGCC AAGCCCAACT AGAAGCCCAA CTCGGGCAAG AGAAAGTCGA TCGCGATCGC
ACTGAACGCC AACTGCAAGA ACAGCGATCG CAGCGACAAA ACCTCGTCTG GCAGCAAGAA
AAACGCCAGC AACAACAACA GGAACTCCAA CAGCAGCTGA CCGATCTCGA AGTCCAACTT
CAGGCGGAGC AGCAGGAATT GCCGCAACCC CTGCCCGATA TTCCCGAAAT GGTGCAGCAA
CAGGGCATCG AAGCACTGCA GCATGAATTG CGATCGCTGG CGAAGCGGAT TCAGGCGATG
GAGCCGGTCA ACATGCTGGC GCTGGAGGAA TACGAGCGCA CCCAAGCGCG ACTGGAGGAG
CTGTCAGAGA AGCTAACGAC AATTGAAGCG GAGCGAACGG AATTACTGCT GCGCATCGAA
AATTTCACGA CTCTGCGCCG CCGAGCCTTC ATGGAGTCGT TTGAGGCGAT CGATCGCAAC
TTCCAAGAGA TCTTTGCGCA CCTGTCGGAC GGGGATGGCT CGCTCCAACT CGACAATCCT
GAAGATCCCT TTAGCAGCGG CCTCAACCTG ATTGCCCATC CCAAGGGCAA GCCGGTGCGT
CGTCTAGCCT CGATGTCGGG TGGTGAAAAG TCGCTGACTG CCCTCAGTTT CATCTTTGCC
CTGCAGCGCT ACCGGCCCTC CCCCTTTTAT GCGCTGGATG AGGTAGACAG CTTTTTGGAT
GGGGCGAACG TCGAACGGCT GGCGCGGGTG ATTCGTCAGC AAGCGCAAGC AGCCCAATTC
ATCGTGGTCA GCCATCGCCG ACCGATGATT GAAGCGGCGG AGCGCACAAT TGGCGTCACC
CAAGCTCGTG GCGCTCACAC CCAAGTTCTG GGGATCCCAC AACCCTAG
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| Protein sequence | MVYIKQIELS HFKSFGGTTS LPLLPEFTVV TGPNGSGKSN ILDALLFALG LSSSKGMRAD
RLPDLVNSTY ASRSRSTVET LVTVTFALDD WQPEAEETEE GEGTGLQPGM AEWTVSRKLR
VTPSGTYTST YAMNGEACTL QQLHEQLSRL RIYPEGYNVV LQGDVTNIIS MSPRDRRQII
DELAGVAQFD RKIEQAKGKL EAVKEREDRC RIVEQELIEQ RDRLAKDREK AQKYQALRQE
QATKQSWEAV LRWRAGQRQV QALQRSLAQL ATDAATDQQT QQTLEQQIQQ TEATLDRLNQ
RVKALGEEEL LKLQAALAQQ EAEQRQSQRQ QQELVESQTQ TQQQIQALLQ TQAQLQTEGQ
QQAEQARTLQ TTIAQTLQPQ YQQALEQVEA ARQSAHALAA QSQDWVTRQT SLRQQADAIA
AQVEPQRAEQ AQLQERQTQL QQQLEATQSA LVTVTAELET ETEQAEGDRA ALSQAEAAVV
TAADQLVRLE EELQIQQETR DRLLKEQRDK QRQLDRQESL RQAMQETQGT AAARLILDTG
LPGVHGLVAQ LGRVEPRYQL ALEVAAGGRL GYLVVDDDGV ASAGIELLKQ KKAGRITFLP
LNRIRAGKQP EIPRWQQPEG LVDLAIALVD CDDRYREVFK FVLGGTVVFE RLDQARRYMG
QYRIVTLDGE LLETSGAMTG GSIARRSGGL SFGSPDSGES AEVRAIRDRL EQLEVILDRS
ELQILNLQAA IKDAASTLSD RRQQQREQQL TVQQRQQTLQ RLQQQQQQLN AELQQRQQQA
SQAQARLAAL ALELPAALKQ LKTLRQALAE LEDSPIHGEW QQRQTLLQQQ EALLQQQETA
LRQAEQQLQQ LQTDQKRLQE RAIAAQTQVS QLRQQQGEQL NRLAQLDEQQ RQQATAIAQL
QQRQAQLEAQ LGQEKVDRDR TERQLQEQRS QRQNLVWQQE KRQQQQQELQ QQLTDLEVQL
QAEQQELPQP LPDIPEMVQQ QGIEALQHEL RSLAKRIQAM EPVNMLALEE YERTQARLEE
LSEKLTTIEA ERTELLLRIE NFTTLRRRAF MESFEAIDRN FQEIFAHLSD GDGSLQLDNP
EDPFSSGLNL IAHPKGKPVR RLASMSGGEK SLTALSFIFA LQRYRPSPFY ALDEVDSFLD
GANVERLARV IRQQAQAAQF IVVSHRRPMI EAAERTIGVT QARGAHTQVL GIPQP
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