Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1991 |
Symbol | |
ID | 3774178 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 2061920 |
End bp | 2062321 |
Gene Length | 402 bp |
Protein Length | 133 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637800436 |
Product | large conductance mechanosensitive channel protein |
Protein accession | YP_401008 |
Protein GI | 81300800 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1970] Large-conductance mechanosensitive channel |
TIGRFAM ID | [TIGR00220] large conductance mechanosensitive channel protein |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.595696 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.288973 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTTCTC GTCGTGGGCG AGCTGTTGGC TTTATTCGTG ATTTTCAAGC GTTTATTCTC AAGGGCAATG TTGTCGAATT GGCAGTCGCC GTGATTATTG GCGGTGCTTT CAATAAGATT GTGAGCTCTT TTGTGGGCGA TTTAGTGATG CCACTTGTCA ATCCCCTGAT TCCAGGAGGA GACTGGCGAA CAGCAGTCAT TGGCCCCGGA CTCAAAATCG GCAGCTTTGC TGGGTCGGTC ATTGATTTTC TGATCATTGC CTTTGTTCTC TACCTTGCCA TCCGAGCGAT CGAGCGCTTC AAGCGCAAGG AAGAAGCTGT TGTAGCAGCC GCAGAACCGG ATGTTCAACA GCAAATGTTG GCAACACTTG AGCGAATTGC AGACAACCTC GAAGCTCGTT AA
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Protein sequence | MTSRRGRAVG FIRDFQAFIL KGNVVELAVA VIIGGAFNKI VSSFVGDLVM PLVNPLIPGG DWRTAVIGPG LKIGSFAGSV IDFLIIAFVL YLAIRAIERF KRKEEAVVAA AEPDVQQQML ATLERIADNL EAR
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