| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1971 |
|---|
| Symbol | |
|---|
| ID | 3774158 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus elongatus PCC 7942 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007604 |
|---|
| Strand | - |
|---|
| Start bp | 2041481 |
|---|
| End bp | 2042239 |
|---|
| Gene Length | 759 bp |
|---|
| Protein Length | 252 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637800416 |
|---|
| Product | peptidase M20D, amidohydrolase |
|---|
| Protein accession | YP_400988 |
|---|
| Protein GI | 81300780 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase |
|---|
| TIGRFAM ID | [TIGR01891] amidohydrolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCTAGTCT GTCCTGTGCT TGATCGAATT CGTGAGGTTG CGACGCGCCT TGAACCGCGT
CTTCTAGAAA TTCGCCGCCA TCTCCATGCC CATCCAGAGC TCAGCGGCCA CGAACACCAA
ACCGCGGCCT ACGTTGCCGG TGTGCTGTCC TCCTGTGGGC TACAAGTCCG GGAGGGCGTA
GGCCGTACGG GCGTCGTGGG GGATCTGCCA GGAACGGGGC GCGATCGCCG TTGCCTAGCG
CTGCGAACCG ATATGGATGC CCTGCCGATC GAGGAGCAGA CTGGCTTGCC CTTTGCCTCT
CGCCAGCAGG GGATCATGCA TGCCTGTGGC CATGATCTGC ACACCACCTT GGGCCTTGGG
GCTGCCATGG TCTTAAGTGA ACTCGGTGAA CCGCTGCCAG GAGACGTGCG CTGGCTATTC
CAGCCTGCTG AAGAAATTGC CCAAGGGGCA CGCTGGATGG TGGCGGCTGA GGCCCTAGAA
GGGGTGGATG CAATCTTAGG AGTCCACGTT TTTCCTTCGA TTCCGGCAGG GGTTGTGGGC
ATTCGCTACG GCGCTCTAAC GGCTGCCGCC GATGACCTTG AGATTGTGAT TCAAGGGGAA
TCGGGGCATG GTGCTCGTCC CCACGAGGCG AAGGACGCGA TTTGGATTGC GGCCCAGATC
ATCACAATGC TGCAGCAAGC GATCAGCCGC ACTCAAAATC CGCTGCGGCC GGTGGTTTTA
ACTATCGGCC AAATTCAAGG GGGCGAGCTG CTAATGTGA
|
|---|
| Protein sequence | MLVCPVLDRI REVATRLEPR LLEIRRHLHA HPELSGHEHQ TAAYVAGVLS SCGLQVREGV
GRTGVVGDLP GTGRDRRCLA LRTDMDALPI EEQTGLPFAS RQQGIMHACG HDLHTTLGLG
AAMVLSELGE PLPGDVRWLF QPAEEIAQGA RWMVAAEALE GVDAILGVHV FPSIPAGVVG
IRYGALTAAA DDLEIVIQGE SGHGARPHEA KDAIWIAAQI ITMLQQAISR TQNPLRPVVL
TIGQIQGGEL LM
|
|---|
| |