Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1959 |
Symbol | |
ID | 3774144 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 2030340 |
End bp | 2032142 |
Gene Length | 1803 bp |
Protein Length | 600 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637800402 |
Product | prolyl-tRNA synthetase |
Protein accession | YP_400976 |
Protein GI | 161344091 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0442] Prolyl-tRNA synthetase |
TIGRFAM ID | [TIGR00409] prolyl-tRNA synthetase, family II |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCCTTT CTCAGATGCT GTTTGTGACC CTCCGCGAGG ATCCAGCAGA AGCGGAAATT CCCAGTCACA AATTGCTCTT GCGGGCGGGC TATATCCGCC GGATTGCCAG CGGCATCTAC GCCTACTTGC CGCTGATGTG GCGGGTATTA CGCAAGGTCT CGCAGATTGT GCGCGAAGAG ATGGATGCGA CCGGCGCACA GGAAACCTTG TTGCCGCAAC TGCAACCGGC GGAACTCTGG CAAGAGTCGG GGCGTTGGGA GACCTACACC AAGGCCGAGG GGATCATGTT CTCTCTGGAC GATCGCCAAC AACGGCAGTT GGGCTTGGGG CCGACCCACG AGGAAGTGAT CACTGCTGTG GCGCGGGATC TGATTCGTTC CTATCGCCAG CTACCCCAGA ACCTCTATCA AATTCAGACT AAATTCCGGG ATGAGATTCG GCCGCGCTTT GGTCTAATGC GGGGTCGGGA ATTCATCATG AAGGACGCCT ACTCCTTCCA TGCTGATGAG GAAAGTCTGC GCCAGACCTA CGCGGCAATG GATCAGGCTT ATCGCAATAT CTTCCGGCGC TGTGGTCTCC AATTCCGCGC CGTTGAAGCA GATTCCGGTG CAATCGGTGG TTCTGCCTCG CAGGAATTTA TGATTCTGGC GGATGCGGGC GAAGACGAAA TTCTCTACAC CGAAGATGGG CGCTACGCTG CCAACGTTGA GAAAGCTGTC TCACTGCCTG CGGAAGCGAT CGCCTCTGCT TTCACAACTT TTGAAAAGCG AGAAACCCCC GGCACTGACA CGATCGCAAG CCTCTGCGAG TTCTTGAAAG CTGATCCAAC GCAGGTTGTT AAGCAAGTCC TGTATCAAGC AGTCTTTGAT AACGGCAAAC TGCTGCCGAT TCTGATTAGC ATTCGCGGCG ACCAAAGCGT CAATGAGATC AAGCTGACCA ATGAGCTGAC TCGTCGGGCG GCGGACTACG GTGCCAAAAC CGTGATTGCC TTGACGGTGC CGGATGCAGA AGCCCTGAAG AAATGGACAG CGGCGCCGCT ACCGCTGGGT TATCTCGGCC CTGATCTGGC GGATTCTGCG ATCGCGGTTA ACGAGAGCAT CATTCCCAAG TTCCTACGGC TTGTTGATCC GACGGCGGCA GAACTGCAGA ACTTCGTCAC AGGTGCCAAC GAAGTCAACT TCCACGTAGT CGGCGCGAAT TGGGAAACCA ATTTCCCGAA ACCAGCCGTG GTGGATCTGC GGACAGCCCT AGTCGGCGAT CGCGCTCAGC ATGATTCCAG CCAAGTGTTG GCATCTGCTC GCGGGATTGA AGCAGGTCAC ATCTTCCAGT TGGGTCTGAA ATATTCCCAA GCGATGGGCG CGACCTTCAC CACCGAAAAT GGAACTGAGG AACCCTTGTG GATGGGCTGC TATGGCATTG GGGTGTCGCG GGTGGCTCAG GCTGCAGTGG AACAGTCCTA CGACAAGGAC GGCATCATCT GGCCAGTTGC GATCGCGCCT TATCAAGCGG TGGTGGTGAT TCCCAACATC ACGGACACGG AGCAGGTCGC AGCAGCTGAG AAAATCTATG CGGATTTGAC AGCAGCAGGG ATTGAAACAC TACTCGACGA TCGCGATGAG CGGGCAGGCG TCAAATTCAA AGACGCCGAT CTGATTGGCA TTCCCTACCG CATCGTCACC GGGCGATCGC TGAAGGAAGG CAAGGTCGAG GTAGTGCAGC GGGCTAGCAA GGAATCCAGT GTGATTGCTG TGGGTTCAGT GGTTGAAACA GTGCAAGACT GGATTGCAGC CGCGATCGTC TAG
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Protein sequence | MRLSQMLFVT LREDPAEAEI PSHKLLLRAG YIRRIASGIY AYLPLMWRVL RKVSQIVREE MDATGAQETL LPQLQPAELW QESGRWETYT KAEGIMFSLD DRQQRQLGLG PTHEEVITAV ARDLIRSYRQ LPQNLYQIQT KFRDEIRPRF GLMRGREFIM KDAYSFHADE ESLRQTYAAM DQAYRNIFRR CGLQFRAVEA DSGAIGGSAS QEFMILADAG EDEILYTEDG RYAANVEKAV SLPAEAIASA FTTFEKRETP GTDTIASLCE FLKADPTQVV KQVLYQAVFD NGKLLPILIS IRGDQSVNEI KLTNELTRRA ADYGAKTVIA LTVPDAEALK KWTAAPLPLG YLGPDLADSA IAVNESIIPK FLRLVDPTAA ELQNFVTGAN EVNFHVVGAN WETNFPKPAV VDLRTALVGD RAQHDSSQVL ASARGIEAGH IFQLGLKYSQ AMGATFTTEN GTEEPLWMGC YGIGVSRVAQ AAVEQSYDKD GIIWPVAIAP YQAVVVIPNI TDTEQVAAAE KIYADLTAAG IETLLDDRDE RAGVKFKDAD LIGIPYRIVT GRSLKEGKVE VVQRASKESS VIAVGSVVET VQDWIAAAIV
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