Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1903 |
Symbol | |
ID | 3775266 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 1976983 |
End bp | 1978113 |
Gene Length | 1131 bp |
Protein Length | 376 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637800344 |
Product | hypothetical protein |
Protein accession | YP_400920 |
Protein GI | 81300712 |
COG category | [S] Function unknown |
COG ID | [COG4627] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.298907 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.396986 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTAATA ATAACCAGCT ACAAATAGAT AGTCTAGTCG CTGCAATTCG CCGTGAGGCT ACACAGCTCA CAGATCATGA GGAAGCCTTT TGCACAACAA TAGTCTCCTC TCAGCAACAG TCGTTAACTG AAATTGACAG ATCAATCAAT GCTGCAATAC AAGCGGTGGA GGACTTGGTA AAGCCTCGTT TGTCCGCTCG GCCAAGCCCT CGTAATTTCT TCAAAAAACT CTGCACAAAA GTAGGGCTTA CGATTCTTGA TCGACTTGAG AGGCGACGTT GTAAAGCTGA ACTTACTCTC CTAGAGACCA TTCAATATTT ACGGGCTAGT CAGCAACAGC TCAGAGCGGA ATTTAATGAT TTCCAATCTG TAACTGATCA AGCTTTAGTC CGACAGTTTA ATCATCTTCA GCGGCAAATC GATCGCACAA GTGGTTGCGT AAACTTAAAC CCTGACTTAG AAAAACTATT AGAAGCTTTT TACTGTCAAT TTGAATCTGA ATATCGAGGG TCTAGTGAAT CTGTTCGCCA TCGACTGAGA CCCTATCATG ATCGCCTACT CAACTCTGAC TATCCTCTAG AAATCGTTGA CCTGGGTTGT GGTCGGGGTG AATGGTTGTC TTTAGTTAAT CAGCTTGGTC ACAAAGCGAA AGGCATTGAC TGTAACCCAG AATTCGTTAA CCTTTGTAAG CAGCAAAATT TAGCGGTTGA GTTGGGAGAT GCTATTGTCT GGTTGCATTC ACAGGCAGAT AACAGCTTAG ATGTTATTTC TGCTTTTCAT GTGATTGAAC ACCTATCTTT TACAACTCTA GCTGATTGGT TACAGCAAAT ATATCGAGTT TTAAAACCCC AAGGATGGTT GCTTCTGGAG ACACCGAATA TTAGCCAGTT CCATGTTGGG CTTGTTGATT TTTATCGAGA TCCTACTCAT ATTCATAAGG TTCATCCCCA AACAATTAAG ACTTTACTTC AATGTCTTCG GTTTACTGAT ATAGAGATAG GCTACGTTGA TGCAAATGGA GATAAAGTTC AATGGTTGCC AACTGAAGAG GTAACGTTGC GAGATCCTGG ACAATATGGA GCTTTACCAG CTGATATGGG CATTATTGCC CGAAAAAGAA TAGGGCTCTG A
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Protein sequence | MANNNQLQID SLVAAIRREA TQLTDHEEAF CTTIVSSQQQ SLTEIDRSIN AAIQAVEDLV KPRLSARPSP RNFFKKLCTK VGLTILDRLE RRRCKAELTL LETIQYLRAS QQQLRAEFND FQSVTDQALV RQFNHLQRQI DRTSGCVNLN PDLEKLLEAF YCQFESEYRG SSESVRHRLR PYHDRLLNSD YPLEIVDLGC GRGEWLSLVN QLGHKAKGID CNPEFVNLCK QQNLAVELGD AIVWLHSQAD NSLDVISAFH VIEHLSFTTL ADWLQQIYRV LKPQGWLLLE TPNISQFHVG LVDFYRDPTH IHKVHPQTIK TLLQCLRFTD IEIGYVDANG DKVQWLPTEE VTLRDPGQYG ALPADMGIIA RKRIGL
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