Gene Synpcc7942_1796 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1796 
Symbol 
ID3774371 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1866456 
End bp1866749 
Gene Length294 bp 
Protein Length97 aa 
Translation table11 
GC content57% 
IMG OID637800237 
Producthypothetical protein 
Protein accessionYP_400813 
Protein GI81300605 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.764017 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.00919665 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCTTGGT TTGTCAAAAT CGAGCGAGGG CTGGTGGAAA AAGCAGTTTT TGACCGCTAT 
GTCCCCGCTC ATTTGGACTA TGTCCGTCAG CTCATTGCCG CTGGACATCA GGCCAGCAGC
GGTTACTGGG GCGAGCGTGG CGGTGGCATG CTGCTCTTCC GGGCCGAGTC GCGGCGGCAG
GCAGAGCAAA TTGTTGCGGC AGATCCGCTG GTTCAGGCTG GTTGTGTGAC CTACGAACTG
CACGAATGGT GTGTGGTCTG CTCTGCAACA GCGCAGAATG GATCTTTGGT GTAA
 
Protein sequence
MPWFVKIERG LVEKAVFDRY VPAHLDYVRQ LIAAGHQASS GYWGERGGGM LLFRAESRRQ 
AEQIVAADPL VQAGCVTYEL HEWCVVCSAT AQNGSLV