Gene Synpcc7942_1696 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1696 
Symbol 
ID3775395 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1763712 
End bp1764452 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content59% 
IMG OID637800134 
Producthypothetical protein 
Protein accessionYP_400713 
Protein GI81300505 
COG category[R] General function prediction only 
COG ID[COG1741] Pirin-related protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.578384 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTTCGA CTGCTGATGC CCGCTCGACT TTAACAACCC CGCTGTTTCG ACCGGCAGCG 
GATCGCTTCC ATAGCCAAAT CGAGTGGCTG GATAGTTGGC ACAGTTTTAG TTTTGGGAGT
CACTACGACC CTGCTTGGAT GGGCTTTGGG CCGTTGCGCG TGATCAATGA CGACACGATC
GCGGCAGGAC GTGGTTTTGG CATGCACCCG CACCGCGACA TGGAAATTGT CACAGTCATG
GTTGACGGTG AGCTGACCCA CCAAGATTCG CTGGGGAACC GCGAGGTGCT GCGGGCCGGA
GAAGTGCAGC GGATGAGTGC TGGCACCGGT GTCGTTCATA GCGAAGTCAA CGCGAGCGAT
CGCGCTTGCC GGCTCCTGCA AATCTGGATT GAACCTGTTC GTTTGGGGAT TCCCCCTGCT
TATGAGCAGA AGCCCTTTGC GCTCGCGACG GGTTGGACGC CGTTGCTCAG TCCCACACCC
GATCAAGAGA GTATGGCGAT CGATCGCCCC ATCCGACTTT GGCGGGCGCA ACCTGCTCCG
GGCACGACCT TAGAAATCCC GATCGCGGCG GAAACCCTCG GCTGGATCCA GCTGATTGAT
GGAGCTGTCA CGGTCGAGTC TGAGGCTGGC ACTTCCCAGA CTCTGGTGCG TGGGGATGGC
CTCGGTTTCA GCCAAGGCCA AGTCCAGCGG CTAACTAGCA GCCAAGCAGG GACTGATCTC
CTGTTGTTTG AGCTGGTTTA G
 
Protein sequence
MVSTADARST LTTPLFRPAA DRFHSQIEWL DSWHSFSFGS HYDPAWMGFG PLRVINDDTI 
AAGRGFGMHP HRDMEIVTVM VDGELTHQDS LGNREVLRAG EVQRMSAGTG VVHSEVNASD
RACRLLQIWI EPVRLGIPPA YEQKPFALAT GWTPLLSPTP DQESMAIDRP IRLWRAQPAP
GTTLEIPIAA ETLGWIQLID GAVTVESEAG TSQTLVRGDG LGFSQGQVQR LTSSQAGTDL
LLFELV