Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1696 |
Symbol | |
ID | 3775395 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 1763712 |
End bp | 1764452 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637800134 |
Product | hypothetical protein |
Protein accession | YP_400713 |
Protein GI | 81300505 |
COG category | [R] General function prediction only |
COG ID | [COG1741] Pirin-related protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.578384 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTTCGA CTGCTGATGC CCGCTCGACT TTAACAACCC CGCTGTTTCG ACCGGCAGCG GATCGCTTCC ATAGCCAAAT CGAGTGGCTG GATAGTTGGC ACAGTTTTAG TTTTGGGAGT CACTACGACC CTGCTTGGAT GGGCTTTGGG CCGTTGCGCG TGATCAATGA CGACACGATC GCGGCAGGAC GTGGTTTTGG CATGCACCCG CACCGCGACA TGGAAATTGT CACAGTCATG GTTGACGGTG AGCTGACCCA CCAAGATTCG CTGGGGAACC GCGAGGTGCT GCGGGCCGGA GAAGTGCAGC GGATGAGTGC TGGCACCGGT GTCGTTCATA GCGAAGTCAA CGCGAGCGAT CGCGCTTGCC GGCTCCTGCA AATCTGGATT GAACCTGTTC GTTTGGGGAT TCCCCCTGCT TATGAGCAGA AGCCCTTTGC GCTCGCGACG GGTTGGACGC CGTTGCTCAG TCCCACACCC GATCAAGAGA GTATGGCGAT CGATCGCCCC ATCCGACTTT GGCGGGCGCA ACCTGCTCCG GGCACGACCT TAGAAATCCC GATCGCGGCG GAAACCCTCG GCTGGATCCA GCTGATTGAT GGAGCTGTCA CGGTCGAGTC TGAGGCTGGC ACTTCCCAGA CTCTGGTGCG TGGGGATGGC CTCGGTTTCA GCCAAGGCCA AGTCCAGCGG CTAACTAGCA GCCAAGCAGG GACTGATCTC CTGTTGTTTG AGCTGGTTTA G
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Protein sequence | MVSTADARST LTTPLFRPAA DRFHSQIEWL DSWHSFSFGS HYDPAWMGFG PLRVINDDTI AAGRGFGMHP HRDMEIVTVM VDGELTHQDS LGNREVLRAG EVQRMSAGTG VVHSEVNASD RACRLLQIWI EPVRLGIPPA YEQKPFALAT GWTPLLSPTP DQESMAIDRP IRLWRAQPAP GTTLEIPIAA ETLGWIQLID GAVTVESEAG TSQTLVRGDG LGFSQGQVQR LTSSQAGTDL LLFELV
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