| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1694 |
|---|
| Symbol | |
|---|
| ID | 3775393 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus elongatus PCC 7942 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007604 |
|---|
| Strand | + |
|---|
| Start bp | 1759930 |
|---|
| End bp | 1762506 |
|---|
| Gene Length | 2577 bp |
|---|
| Protein Length | 858 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637800132 |
|---|
| Product | DNA topoisomerase IV subunit A |
|---|
| Protein accession | YP_400711 |
|---|
| Protein GI | 81300503 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGACT CGATCCAGTT CAACGGCGCT GATCGCATTC TGCCGACAGC ACTCCACCAA
GAAATGCAGC GCTCCTATCT GGAGTACGCC ATGAGTGTGA TCGTGGGTCG GGCCTTGCCC
GATGCTCGCG ATGGCCTCAA GCCAGTACAG CGGCGCATTC TTTATGCCAT GCATGAACTG
GGTTTGACCC CCGATCGCCC CTTCCGCAAA AGTGCGCGGG TGGTGGGTGA CGTGCTGGGT
AAGTATCATC CCCACGGCGA TCAGGCAGTT TACGACGCGC TTGTGCGCTT GGTACAGGAC
TTTAGCAGTC GCTATCCCTT GCTGGCGGGG CATGGCAACT TTGGCTCGAT CGATAACGAT
CCGCCCGCCG CGATGCGCTA CACCGAGACG CGCTTAGCGC CGGTGAGTCA TGTGGCACTG
CTGGAAGAAA TCGGCGAAGA AACCGTTGAT TTTGTTGCCA ACTTCGACAA CTCCCAACAG
GAGCCTTCAG TTCTCCCGGC TCAGCTTCCG TTCCTGCTGC TGAATGGTTG CTCGGGCATT
GCTGTTGGCA TGGCAACCAA CATTCCGCCC CATAATTTGG GCGAAATTGT CGATGCGTTG
ATTGCCCTGA TCGATCGCCC CCAACTGAGC GATCGCGACT TGCTGCGCTA TGTCCCCGGC
CCCGACTTTC CCACTGGCGG GGAAGTGATT GGCAGCCAAG GGATTCTCGA TGCCTATCTC
GAAGGTCGCG GCAGTATTCC GGTGCGCGGC ATCGCTCGTA TCGAAGAAAT TCAACCGGGG
AAAGGCCGCC ACCGTCGGCC GGTGATCATC GTCACGGAAC TGCCCTACCA AGTCAGCAAA
GCGGGCTGGA TTGAAAAAGT TGCCGATTTA GTCAATGACG GCAAGCTGCA GGGCATCGCT
GATATTCGCG ATGAAAGCGA TCGCGAAGGA ATGCGGGTGG TAATTGAATT GCGCCGCGAT
GCCCAAGCGG ACAAGGTGCT GGAGCAGCTC TACAAACGCA CGGCCCTGCA GAGCAACTTC
GGCGCTATTT TGCTGGCGAT CGTCGAAGGT CAACCCCAGC AACTCAGCCT CAAGCAACTG
CTGGAACAGT TCCTCAGCTT TCGGGAAGGA ACGCTGCGCC GCCGCTATGG GCATGAGCTC
GAGCAGACCG AACGCCGCTT GATGATTTTG GAAGGCTTGC TGCGTAGCCT TAGTGACTTG
GATGGTCTGA TCGAAATTCT GCGCCAATCA CCGGATGGAG GCACGGCTCG GGCGCGCCTA
CAGGTTCACT TCGATTTGAA TGAACGCCAA GCCGATGCCG TCCTCTCGAT GCCGATGCGA
CGAATCACCA GCCTAGAGCA GGAGCAACTG CAGCAGGAGG CGGCTAACCT GCGGGAGCAA
CAAGCCCGCC TGCAAACCCT GTTAGGCGAT CGCCCTACCC TGCTCAAAGC GCTGAAGAAA
GATCTGCGTG ACCTGAAACG GCGCTTTGGT AGTCCGCGCC GCACCCGCTT ACCGGAAATC
CCACCGGAAG CGATCGCTGC TCCTAGACAA GTCACTGCAC CAGTTGCTCC TATCAGTGCT
CCGACACCCG CAACGGCCGG CCCAATTCAA GGCGAGCTGA TCTTCAACTC GGCAACCGAC
TCGGCAGTCC CAGATTCTGC CCCAGTCATT GCACCGCGCT TTGCTTTCCA AGAATCGACT
TGGCTTTGCC TCAGCGATCG CGAGCAACTG CAGGCTGCCA GTGCTACTGA ACTGGAACCG
TGGCTGAAGG CTAAGTCCGG CGCTCAAGAG CGAACGGATT TTCCAAAAGT TCTGCAGTGG
GCGGATCCCA GACAAGATCT CCTGGTGATC ACTGCCGAGG GCCGCGCCTA CCGGCGATCG
CTGCGTGAAG TGCATCCGGG TCCGATCGCC AATCTCTTGC CCACCGGTCG CCAGTCCACT
GCGATCGCCG CCACCCTACT CTTGCCCCTT GCGAGTGAAG AGCGATCGCT GCTGCTGCTC
AGCAGTCAAG GGCGTGTCAA ACGGCTAGCT TTGACTGAGC TGGCGGAAAT TTCTAATCGA
GGACTGCAAC TGCTGAAGTT GGCGGAGGAA GAAATCATCC AAGCTGCCTG CCTCTGTGCG
CCCCAACAAG AAGTTTTGCT CGGCAGTAGT GGTGGTCGTT TGCTGCGCTT GTCGCTGTCG
GAACTGCCGC TGGCGAGTCG CATATCCCGA GGTCAACCAC GACTCCTGCG CCTACGGGAG
GGCGAGCAAC CACTAGGCTG CTTGAGTCTG CCCTCGGGCC AAGACCTCCT GCTTGTCTCG
ACACTCGGTT TAGTCAAGCG GCTGCCGCTC GGACTCTTGC GCCTCTGTCG CGCCGGTGAT
TTAGGCAACA ACGCCTTCCG ATTCACCGAT AAACGCGATC GCTTGATTGC CCTCCTACCG
GCTCCCAGCC AAGGACTCGC CATTTTTGCC AGCGATCAAC GCCTCTGGCA GCGATCGATC
AGCACGATCG CAGTCACGGG TACGGATGCC GAAGGTCAAA CCTTATTCAA CCTGCGGTCG
ACTGAAACTC TACAGTCTGC AACCACACTG GAGGGCGATC GGGTCACAAC CGTTTAG
|
|---|
| Protein sequence | MTDSIQFNGA DRILPTALHQ EMQRSYLEYA MSVIVGRALP DARDGLKPVQ RRILYAMHEL
GLTPDRPFRK SARVVGDVLG KYHPHGDQAV YDALVRLVQD FSSRYPLLAG HGNFGSIDND
PPAAMRYTET RLAPVSHVAL LEEIGEETVD FVANFDNSQQ EPSVLPAQLP FLLLNGCSGI
AVGMATNIPP HNLGEIVDAL IALIDRPQLS DRDLLRYVPG PDFPTGGEVI GSQGILDAYL
EGRGSIPVRG IARIEEIQPG KGRHRRPVII VTELPYQVSK AGWIEKVADL VNDGKLQGIA
DIRDESDREG MRVVIELRRD AQADKVLEQL YKRTALQSNF GAILLAIVEG QPQQLSLKQL
LEQFLSFREG TLRRRYGHEL EQTERRLMIL EGLLRSLSDL DGLIEILRQS PDGGTARARL
QVHFDLNERQ ADAVLSMPMR RITSLEQEQL QQEAANLREQ QARLQTLLGD RPTLLKALKK
DLRDLKRRFG SPRRTRLPEI PPEAIAAPRQ VTAPVAPISA PTPATAGPIQ GELIFNSATD
SAVPDSAPVI APRFAFQEST WLCLSDREQL QAASATELEP WLKAKSGAQE RTDFPKVLQW
ADPRQDLLVI TAEGRAYRRS LREVHPGPIA NLLPTGRQST AIAATLLLPL ASEERSLLLL
SSQGRVKRLA LTELAEISNR GLQLLKLAEE EIIQAACLCA PQQEVLLGSS GGRLLRLSLS
ELPLASRISR GQPRLLRLRE GEQPLGCLSL PSGQDLLLVS TLGLVKRLPL GLLRLCRAGD
LGNNAFRFTD KRDRLIALLP APSQGLAIFA SDQRLWQRSI STIAVTGTDA EGQTLFNLRS
TETLQSATTL EGDRVTTV
|
|---|
| |