Gene Synpcc7942_1692 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1692 
Symbol 
ID3775391 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1758418 
End bp1759329 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content47% 
IMG OID637800130 
Productmrr restriction system protein 
Protein accessionYP_400709 
Protein GI81300501 
COG category[V] Defense mechanisms 
COG ID[COG1715] Restriction endonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.337411 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCTAC CGGATTATCA AGCCCTAATG CTGCCGCTCT TGCGATTACT AGCAGATCAG 
CAAGTCCATC GAACTCGCGA CGCTATTGAA GCCCTAGCAG GGTCTTTCCA ATTAACACCT
GCTGAAAGAC AGCACTTGTT ACCCAGCGGC AAACAATTTA CATTTGACAA TCGAGTTGGT
TGGGCACGCA CCTACCTCAA GAAAGCAGGA TTAATTGACA GCCCTCAACG AGGATTTTTG
CAGATTACGA CTATAGGGCA GGAAGTACTC CAACAAAATC CTCCGAAGAT CGACGTTAGC
TTTCTTGAGC AGTTCGATAG CTTTCGAGAA TTTCGAGGGC TATCTGATAC GAATACGGTT
ACTCCCGCGA TCATGAATCT GACTCAAACT CCGAATACCC CTGAAGAAGA TTTAGATGCG
GTCTATCATC AGCTGCGGTC TGCTCTCCGG TCTGATTTGC TGCAAACGAT CAAGAGCTGT
TCGCCCGCCT TTTTTGAGTG CCTAGTTGTT GAACTGTTGG TGGCAATGGG CTATGGCGGC
TCGCGTCTTG AGGCGGGTCA AGCGATCGGC CGAAATAACG ATGAAGGGAT CGACGGCATT
ATCAAAGAGG ATCGCTTGGG TTTAGACATT ATCTATATCC AGGCGAAGCG TTGGGAATCA
GTTGTTGGTC GCCCCGAAGT TCAAAAATTT GCAGGAGCAC TGCAAGGACA ACAAGCCCGT
AAAGGCATCT TCATCACGAC TTCGACCTTC TCCAAGGAAG CTGCCGATTA TGTTCGTAAG
ATTGAGTCAA AAATTATTTT GATTGATGGC CAAACGTTAG CCGAATACAT GATTGATAAC
AATGTTGGTG TGGTGGTTGA AGCAACCTAT GAGTTGAAGC GGATCGATCG CGATTACTTT
ACTGAAGACT GA
 
Protein sequence
MPLPDYQALM LPLLRLLADQ QVHRTRDAIE ALAGSFQLTP AERQHLLPSG KQFTFDNRVG 
WARTYLKKAG LIDSPQRGFL QITTIGQEVL QQNPPKIDVS FLEQFDSFRE FRGLSDTNTV
TPAIMNLTQT PNTPEEDLDA VYHQLRSALR SDLLQTIKSC SPAFFECLVV ELLVAMGYGG
SRLEAGQAIG RNNDEGIDGI IKEDRLGLDI IYIQAKRWES VVGRPEVQKF AGALQGQQAR
KGIFITTSTF SKEAADYVRK IESKIILIDG QTLAEYMIDN NVGVVVEATY ELKRIDRDYF
TED