Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1624 |
Symbol | |
ID | 3775693 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 1692985 |
End bp | 1693644 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637800060 |
Product | riboflavin synthase subunit alpha |
Protein accession | YP_400641 |
Protein GI | 161344093 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0307] Riboflavin synthase alpha chain |
TIGRFAM ID | [TIGR00187] riboflavin synthase, alpha subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.137296 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.0697591 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTTACAG GGTTAGTGCA AGCGCTCGGG GAACTGACGG TTCTGGAGGG ATCAGTTCGA ATCCACTGCG TTGCTGGCGA CACACAGTCG ATTTTGCAGG ATCTAGCGAT CGGCGACAGT ATTGCTGTCG ATGGCATTTG TCTGACGGCA ACTCAATGCC TCGGTAATGG GTTCTTGGCG GATGTTTCAC CGGAAACGCT CCAGCGGTCG ACCTTGGGGG ATTTGCCCCC CGGCAGTTTG GTCAACCTCG AAAGCTCCTT GCGGGCAGGC GGTAAAGTCG GCGGGCACTT TGTCACGGGT CACGTCGATG GCGTCGGCTG GCTGATCAGT GCTGAAGCTA CTGAACAATC TTGGCTGCTG AAATTTGGAG TACCAGCCGG TTCACTGCAG CGCTATCTCG TCGAGAAAGG CAGTATCGCT GTCAATGGCA TCAGTTTGAC GATCGCGGAC TGCGATCGCG AAGGGCATTG GTTTACCGTG GCGGTGATTC CCCACACCTA TCAGGAGACG ACTCTGAGAC GCCTGCAAGC CGGCGTTCGC GTCAACCTTG AGGGCGACAT ACTCGGTAAG TATGTGGAAC GGCTGCTGCG TCATTCGGGT CATTCCACCC CCCAGTCCGA TATCAGCCTA GAGTTCTTGA CAGAGCATGG CTATGTCTGA
|
Protein sequence | MFTGLVQALG ELTVLEGSVR IHCVAGDTQS ILQDLAIGDS IAVDGICLTA TQCLGNGFLA DVSPETLQRS TLGDLPPGSL VNLESSLRAG GKVGGHFVTG HVDGVGWLIS AEATEQSWLL KFGVPAGSLQ RYLVEKGSIA VNGISLTIAD CDREGHWFTV AVIPHTYQET TLRRLQAGVR VNLEGDILGK YVERLLRHSG HSTPQSDISL EFLTEHGYV
|
| |