Gene Synpcc7942_1599 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1599 
Symbol 
ID3775023 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1665097 
End bp1666182 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content60% 
IMG OID637800032 
Producthypothetical protein 
Protein accessionYP_400616 
Protein GI81300408 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG2385] Sporulation protein and related proteins 
TIGRFAM ID[TIGR02669] SpoIID/LytB domain 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.899582 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.526265 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGGTC GGTCGGCACT GGCAGAGAAA ACTACTGGGC GATCGCCGCA ACTCGCTTGG 
TGGCAACAAC CCAGGCGCTG GTTATTGGGT GGATCGGTGG TGCTTCCGGT GCTGGCGCTC
TGGGGTGTCA ACCATTTGCG ACAGTCGCAG CCTAATGCGG CAGAGTTACA GGCGATTCAA
GACTCAGAAC GGGCGCTAGA GCGTCTGCTT AGCGTTAATC CTGCCGGTAC TGCACCGGCA
GCCAACTCCC AACCGGCAGC AGCGCCTTCA ACGCCAGCCC GTTCCCCTAC CGATACCAGT
CAGGCTCGCC CCGATCCGCG ATCGGCCCCG TCCTTAGCCA TTCCCAGTAG TAATCAGCCC
GCACCGGCTC TCCTGATTCG GGTTGCGATC GCCCGCGAAG GCTCTCAGGC CAGTGTTGGC
AGCCAAACCG AGAGCTATCT GACCCGAGAA GATGGCCAAA TTTTAGGGAC GCTACCGGCG
GGTCGGTCTG CTAATGTTGT CGCCAGCGCC GGTCGACTGC AGCTCGCGAG TTGGGCTTCG
GGGGGGCCGC TCTGGCTGCA ACCCTCGCAG GGAGGTGCGG TTCTCGTGAA TGGCCAGCCC
TATCGCGGCA AGCTCAAACT GATTGCTGAG GGCGATCGCC TGATTGCGGT TAACTACGTC
GATCTGGAGC AGTATTTGGT CAGTGTGGTC GGAGCAGAAA TGCCGGCCAG TTGGCCGATT
GAAGCGCTGA AAGCCCAAGC CGTGGCCGCC CGTTCCTACG CGATCGCCCA CATGGCTCGC
CCCGCCAGTG CCTACTTTGA TCTCGGCTCA ACGACACGCT GGCAAGCCTA CAACGGCATC
AATAGTGAAG CCACTCGGTC AGCGCAAGCC GTGCAGCAAA CAGCAGGCCT TCTATTGAGC
TATCGCGGCG GCATCGTCGA GAGTCTCTAT GCGGCAACCT ATGAAATCGT TGCGGAAGCG
CATGGTCATC TGGGAGCCAG TATGAGCCAG CACGGTGCTC GGGATCTGGC CGAACAGGGT
TTTGATTTCA CGCGCATTTT GGGCAACTAT TATCGAGGTG CCCAGCTGGC GCGACTTTCC
CTGTAA
 
Protein sequence
MNGRSALAEK TTGRSPQLAW WQQPRRWLLG GSVVLPVLAL WGVNHLRQSQ PNAAELQAIQ 
DSERALERLL SVNPAGTAPA ANSQPAAAPS TPARSPTDTS QARPDPRSAP SLAIPSSNQP
APALLIRVAI AREGSQASVG SQTESYLTRE DGQILGTLPA GRSANVVASA GRLQLASWAS
GGPLWLQPSQ GGAVLVNGQP YRGKLKLIAE GDRLIAVNYV DLEQYLVSVV GAEMPASWPI
EALKAQAVAA RSYAIAHMAR PASAYFDLGS TTRWQAYNGI NSEATRSAQA VQQTAGLLLS
YRGGIVESLY AATYEIVAEA HGHLGASMSQ HGARDLAEQG FDFTRILGNY YRGAQLARLS
L