| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1555 |
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| Symbol | |
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| ID | 3774979 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | + |
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| Start bp | 1611906 |
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| End bp | 1612748 |
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| Gene Length | 843 bp |
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| Protein Length | 280 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637799988 |
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| Product | Thf1-like protein |
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| Protein accession | YP_400572 |
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| Protein GI | 81300364 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03060] photosystem II biogenesis protein Psp29 |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.0657894 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.198301 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCCTTCG GTCGTTGCTT GGCAAAGCGG GCGATCGCGG CTCACAATTG TTCCAGCTCC
TGCGCGTCAG TGCCTAACGT GACCTCTGTT CCTACCGTTT CCGATAGCAA GCGTGCCTTC
TACGCTGCCT ACCCGCGTCC CATCAATCCG CTCTATCGGC GCGTGGTAGA GGAGCTGCTG
GTGGAAATCC ACCTCCTCTC GGTCAACACC AGCTTTGTCT ATGACCCGCT GTTTGCCTTG
GGGGTGGTGA CGGCGTTTGA TTCGTTCATG AGCAGCTATC GCCCGATCGA AGCGGTCGGC
CCTCTGTTTA CGGCACTGAC CCAAGCGGTT CGCCAAAATC CGGAACAGTA TCGCCACGAT
GCCAATGCGA TCGCGGAGCA AGTCAGGGGT GTTGGCAGCG ACACGATTCG TCAATGGCTG
ACAGAAGCTG AAGCACTAGG CAACGCGCCA GAGCTAGTGC GCAGCAGCTT CCAAGCGATC
GCCGGGCGGT CGGAGTTCAA GTACAGCCGT CTGTTTGCGA TTGGCTTGTT CAGTCTGCTG
GAAACTGCCG CACCGGATCT TGTGCAGGAC CCCGAGGCTC TTAAGACTAC GGTGACAGCG
ATCGCTGAAC GCTTCCATCT GCCCAGTGAC AAACTGCAGA AGGATCTCGA TTTGTACCGC
AGCAATCTCG AGAAGATGGA GCAGGCGCGG ATCACGATGG AAGAAGCCAT CCAAGCCGAT
CGCCGCAAGC GGGAACAGCG CGAGCAGGAA AAATTGGCGA AAGCCGCTGC CGCTGAGGCC
CCCGCAGCTC TCGAAGCCTC CAGCGACAAT CCCGAGCCTG AAACTAGCGA AACGCCCTCC
TAA
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| Protein sequence | MPFGRCLAKR AIAAHNCSSS CASVPNVTSV PTVSDSKRAF YAAYPRPINP LYRRVVEELL
VEIHLLSVNT SFVYDPLFAL GVVTAFDSFM SSYRPIEAVG PLFTALTQAV RQNPEQYRHD
ANAIAEQVRG VGSDTIRQWL TEAEALGNAP ELVRSSFQAI AGRSEFKYSR LFAIGLFSLL
ETAAPDLVQD PEALKTTVTA IAERFHLPSD KLQKDLDLYR SNLEKMEQAR ITMEEAIQAD
RRKREQREQE KLAKAAAAEA PAALEASSDN PEPETSETPS
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