Gene Synpcc7942_1317 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1317 
Symbol 
ID3775510 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1347173 
End bp1347910 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content60% 
IMG OID637799748 
ProductATPase 
Protein accessionYP_400334 
Protein GI81300126 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1121] ABC-type Mn/Zn transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGAGA TCCAGCACCT CAGCGTTTGC TATCGCCAGC AGCGGGTCTT AGAAGATATT 
TGTCTACAGG TGCAGGCCGG TGAGCAGTTA GCTCTGATTG GGCCGAATGG TGCTGGGAAA
AGTACGTTGG TGCGCGCCAT TCTGGGGTTG CTGACACCCT ATGCCGGAGA AGTGCGCTGG
CGCGGTCGAC CCTTGCGGCG GGGTCAGCGT TCGATCGCCT ACGTGCCCCA GCGATCGCAG
ATTGATTGGC AGTATCCAAT CACCGTGGAA ACAGTGGTGC GACTGGGGGC TGAGGTTCGT
TCTTGGTGGG GGCGATCGCC CCAAACAGGA TCGCGGATCG CGGCGGCTCT CGAACAAGTT
CAATTGACTG AGCTACGCCA CCGGCCCTTG GCGGAACTGT CTGGGGGTCA GCAGCAGCGG
GTATTTTTGG CGCGGGCGAT CGCCCAAGGA GCCGATCTGC TGCTGCTAGA TGAGCCCTTT
ACTGGCATCG ATCACCCGAC CGAGCGGCTG ATGCAGAATC TATTCCAGCA GTTTGCCCAG
CAGGGAAAAA CCCTGATTGT CTGTAGCCAT GAATGGGGCG ACGCCCTCCA GCGCTACGAT
CGCCTGATCT TGCTGAACCG GCGGATCATC TGCCACGACA TTCCCGATCG AGCCCTGACG
CCGCAGAACT TGCAGCAAAC CTTTGGTGCG CGCCAGCCTG ATGCTCCCCC TGATCGACAA
TGGGGCTTTG CTTGCTAG
 
Protein sequence
MLEIQHLSVC YRQQRVLEDI CLQVQAGEQL ALIGPNGAGK STLVRAILGL LTPYAGEVRW 
RGRPLRRGQR SIAYVPQRSQ IDWQYPITVE TVVRLGAEVR SWWGRSPQTG SRIAAALEQV
QLTELRHRPL AELSGGQQQR VFLARAIAQG ADLLLLDEPF TGIDHPTERL MQNLFQQFAQ
QGKTLIVCSH EWGDALQRYD RLILLNRRII CHDIPDRALT PQNLQQTFGA RQPDAPPDRQ
WGFAC