| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1287 |
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| Symbol | |
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| ID | 3773576 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | + |
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| Start bp | 1309030 |
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| End bp | 1310862 |
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| Gene Length | 1833 bp |
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| Protein Length | 610 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637799717 |
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| Product | VCBS |
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| Protein accession | YP_400304 |
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| Protein GI | 81300096 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01965] VCBS repeat |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.535504 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.448224 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACCCT TTAATTTCAG TGCGTTCACT TTCGTCAAGC TCTTTTCACG TCTGTTCAAC
TTCAACAGCA AGCCGATCGC ACAAAGCCAA ACACAAAACC TTACTGAAAA CGCGGGTCTT
TTTAACGGTC AGCTTATCGC CAGTGATCCG AATGGTGATC CAATCACTTT CCTACTTGCC
CCTAATCAAG TAGCTCCAGC AGGATTTACT CTCAATTCTA ATGGTAGCTA TTCCTTTGAC
CAAGACGATA CTAGCTATGA CAGCTTAGGT CTTGGTGATA CTCAAGTTAT TGCAATTGAT
TATGTTGTTA AAGACTCACG TGGAGCAGTC TCTCAGACGA GGACATTGAC AATTAATCTT
GCTGGCACTA ATGATGCTCC AACAATTACT GCAGGGCCTG TTGTTGACGC TAACAGCATC
ACTTTCACTG CAGAAGATAT TGATAGTGAC ACTTTAACAG CACGGGTTGG TACAACTAAC
CTCATGCCTG GAACGGTTAA TAATGGATCG CCAACAACCT CAACGATTAC AGCGCTAGAT
ACTGCTCTGT TCGGTGAACT GAACGTCTTT GATGGAACAG ACTCTGTTGG TGTCGGTTTG
TTTGTAGGAA TCGGGACGAT CGGTGCTGAT ACCTTAACTG CTATAGGTAC TAATCCTGCA
GTGCTCTATG GATTTGAAGG TGACGATAGA CTCACTGGCG CTGATCAAGA CGATACTATT
CTGGGCGGTG ATGGGAATGA CACTATTATC GAAATCAACG GAAACAACTT GATTGAAGGT
AATAATAATA ATGACTCAAT TGTAGGCGGT ACAGACAGCG ATAGAATTAA TGGTGGCGCT
GGTGCTGACA CTATTTTAGG TGGTGATGGT GCTGACACGA TCGATGGTGG TCTTGGAAAT
GACTCAATCT TCGGTGATTC AGGTAACGAT AATATTCGAG GTTTTGGTGA CAGTAATACT
ATTTTAGGTG GGAGCGGTAA CGATACGATT GAAGGAACGA TCGCTGGCAG TAACTCGATC
GATGGTGGTG AAAATGATGA TGTCATCACA GAGATTGGTT TTGGTAGTAC TCTCCTCGGA
GGTCTAGGGA ATGATTCAAT CCTCGGCTTT TCCGCTTCTA CCATTAATGG CGGCGATGGC
AGTGACACCA TTAATGTTGA ATTTGGAAAT AATACTATTG ATGGTGGCAT GGGTAATGAT
TCTATCGAGA TTGCCATTAA TCCTAGTTTT ACTATCTCTG GATCTGGCAA CACAGTTAGT
GGTAGTAATG GGAATGATAC TATTATCGCA ATCAACGGAA GTAACTTGAT TGAAGGTAAT
AATGATAATG ACTCAATCGT AGGCGGTACA GACAGCGATA CGATTAACGG TGGCACTGGC
GCTGACACCT TAACTGGTGG GCTTGGATCA GACACTTTTA GCTTTGCGGC AACAGGTGAC
GGTATCGCAG CGACAAGTGG TGAAAATGGT AGTGTCACCT TCGGGAATGG ATTTGATTAC
ATTACTGACT TTGAATCGAT CGACTCTATC ATTGTAGGAA CTGATGGTTT TACGATTCAA
TCTTCAGTTG GTACTGCATT CATTGATGGT GATGGTAATT ATGTGATTGT CAGTGTTGGA
ATGATCTCAG ATATTTTTGC TATTGCTGGA GTCCTAACTG ATACTACCTT TGAATCGCGA
GATCCAGGAA TGGGTGATTC TTTTACTGAA CTTCTCCTGT TTAAGGCTTC TAATGCAATG
ATGGGTGATG TTATTACTGC CACAACAACT CCAGAAACAT TAATTATTGG AGGTTCAGCA
TTAGATATGC TTCAGCCATA TAGCTGCTGT TAA
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| Protein sequence | MAPFNFSAFT FVKLFSRLFN FNSKPIAQSQ TQNLTENAGL FNGQLIASDP NGDPITFLLA
PNQVAPAGFT LNSNGSYSFD QDDTSYDSLG LGDTQVIAID YVVKDSRGAV SQTRTLTINL
AGTNDAPTIT AGPVVDANSI TFTAEDIDSD TLTARVGTTN LMPGTVNNGS PTTSTITALD
TALFGELNVF DGTDSVGVGL FVGIGTIGAD TLTAIGTNPA VLYGFEGDDR LTGADQDDTI
LGGDGNDTII EINGNNLIEG NNNNDSIVGG TDSDRINGGA GADTILGGDG ADTIDGGLGN
DSIFGDSGND NIRGFGDSNT ILGGSGNDTI EGTIAGSNSI DGGENDDVIT EIGFGSTLLG
GLGNDSILGF SASTINGGDG SDTINVEFGN NTIDGGMGND SIEIAINPSF TISGSGNTVS
GSNGNDTIIA INGSNLIEGN NDNDSIVGGT DSDTINGGTG ADTLTGGLGS DTFSFAATGD
GIAATSGENG SVTFGNGFDY ITDFESIDSI IVGTDGFTIQ SSVGTAFIDG DGNYVIVSVG
MISDIFAIAG VLTDTTFESR DPGMGDSFTE LLLFKASNAM MGDVITATTT PETLIIGGSA
LDMLQPYSCC
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