| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1275 |
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| Symbol | |
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| ID | 3773564 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | - |
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| Start bp | 1299187 |
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| End bp | 1300350 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637799705 |
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| Product | hypothetical protein |
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| Protein accession | YP_400292 |
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| Protein GI | 81300084 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1808] Predicted membrane protein |
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| TIGRFAM ID | [TIGR00271] uncharacterized hydrophobic domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.624785 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAAGA CATTATTGGC GTCGCCGCTC TCACCGAGTG AGCGCGATCG CAAGTCCAGA
GAGTTAGAGC GTACGATTCG CCGTGCCTCG GGGTTAACGC AGTCCTACTT ATTTTTGGTC
GTCACCTCAG CCCTTGTCGC AACCTTTGGG CTACTGGCTA ACAGTGTGGC CGTAATCATC
GGGGCGATGT TGATTGCTCC TGTGTTGCAA CCGCTACGAG GTTTGGCGCT GGCTGGCGTC
AATGGCAATC CTCGCTTGCT CAAACGGGCC GGCATTAGCC TGTTGGTCGC CGTGCTATTG
GCGATTGCCC TGTCTTGGTT TTTGGGGCGG GTCGTCGCCT TGCCCGAATA CGGCAGTGAG
GTACTGGGTC GCACCAATCC CAACCTGATC GACCTCGGGA TTGCTGTAGT GGCTGGTGCC
GTCGCGGCCT ATGCCAGCGT TGAGCACAAC CTCAGCGATG CGATTGCAGG GACCGGGATT
GCAGTTGCTC TGATGCCGCC CTTAGCCACA GTCGGACTGA CGTTAGCGCA GGGGGATTTG
CGAGCCAGTG GCGGGGCAAT GCTGCTCTTT TTGACGAACG TGGTGGGCAT TATTCTGGCT
GAAATTCTGA CCTTCAAGTT GATGGGGGTC AGCCGCCACA AAACCTCACG AGGCCTCTAT
CTCAGCCTAG TCCTCACCTC ACTTTTGAGC ATTCCCCTCG GCCTGAGTTT TTGGGAATCC
CTACAGAATG CTCGTCTGCA ACGTGACCTG CGGGAAATTC TGCTAACTGA AACGATTACG
GTCGGGCGGC AAGTTCAGTT GCAGGGGGTC AATATCAACT GGAACCGCAA GCCGATTGAA
GTACAGCTGC AGGTGCGGGC GCTGCGCCCT GTTACACCGA GACAGGTCAA ACTCGTTGAA
ACATTTCTTG AGAACAAATT GGGGCAACCC GTTCGCCTGA TCTTCTTTGT CTCGAGTTCT
GTGGAAGTGA CCTCCGATGA ACCCCCAGAA TTGGATATCC CCGAGCCGGC CCCAACTAAA
CCGCCTGCTC CTGCTATAGA AACCAGCCCT GCAGGATCAG CTACAGACCC AGCGGCGGAA
GCACAGCCAG CATCGGATAC GGAAGCTGAC TCCCCGACAG AACCAGCCAC AGTGAAGCCA
CCGGCAGCTT CTGAGGTACC GTAA
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| Protein sequence | MPKTLLASPL SPSERDRKSR ELERTIRRAS GLTQSYLFLV VTSALVATFG LLANSVAVII
GAMLIAPVLQ PLRGLALAGV NGNPRLLKRA GISLLVAVLL AIALSWFLGR VVALPEYGSE
VLGRTNPNLI DLGIAVVAGA VAAYASVEHN LSDAIAGTGI AVALMPPLAT VGLTLAQGDL
RASGGAMLLF LTNVVGIILA EILTFKLMGV SRHKTSRGLY LSLVLTSLLS IPLGLSFWES
LQNARLQRDL REILLTETIT VGRQVQLQGV NINWNRKPIE VQLQVRALRP VTPRQVKLVE
TFLENKLGQP VRLIFFVSSS VEVTSDEPPE LDIPEPAPTK PPAPAIETSP AGSATDPAAE
AQPASDTEAD SPTEPATVKP PAASEVP
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