| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1240 |
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| Symbol | nirA |
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| ID | 3773528 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | - |
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| Start bp | 1263263 |
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| End bp | 1264801 |
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| Gene Length | 1539 bp |
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| Protein Length | 512 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637799669 |
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| Product | ferredoxin-nitrite reductase |
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| Protein accession | YP_400257 |
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| Protein GI | 81300049 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0155] Sulfite reductase, beta subunit (hemoprotein) |
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| TIGRFAM ID | [TIGR02435] precorrin-3B synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.678631 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTCAAG CCACCGCTAC TACTGAAAAA CTCAATAAAT TTGAGAAGCT AAAACTTGAA
AAAGATGGTC TCGCTGTCCG CGACCAAATT CAGCATTTTG CCTCGATTGG CTGGGAAGCA
ATGGACCCCG GCGATCGCGA ACATCGCTTG AAGTGGCTGG GTATTTTTTG GCGACCCGTT
ACGCCAGGCC GGTTTATGGC ACGGCTCAGA ATTCCCAGCG GCATTCTGCA GAGCCAACAG
CTCAATGCTC TAGCTAATTT TCTACAACGC TACGGCGACC AGGCCAGCAT TGACATCACC
ACTCGCCAAA ACTTACAGCT TCGGGGTCTT TTGTTAGAAG ACACACCGGA ATTTTTAGAA
CGATTGCATG CAGTGGGCTT AACCAGTGTG CAGTCGGGTA TGGATAACGT TCGCAACATC
ACTGGCTCGC CGGTTGCTGG ACTCGATGCT GCAGAGTTGT TTGATACGCG ATCGCTCATT
CAAGCGCTTC AAGATGATCT GACAGCAGCT GGTCAAGGGA ATTCTGAATT CACCAATTTG
CCGCGCAAAT TCAATATCGC CATTGAGGGT GGACGAGATA ACTCGATCCA CGCAGAAATC
AATGACTTAG CATTTACGCC GGCTTATCAA GATGGCACAC TCGGGTTCAA TGTTTGGGTG
GGGGGCTTCT TCTCCTCGAC CCGAGTGGCA CCAGCCATTC CTCTTAATGC TTGGGTGCCG
GCGGACCACA GCGTGATTCG ACTTAGCCGA GCCATTCTCG AAGTCTTTCG TGACAATGGC
TCACGGGGCA ATCGCCAAAA AACTCGCCTG ATGTGGCTGA TTGATGAGTG GGGGATCGAG
CGCTTCCGCC AAGTCGTTAG CGAAGCCTAC GGAGCGCCCT TAGCAGCGGC AGCTCCCGAG
CTAATGGACT GGGAGAAACG CGACTTCCTC GGTGTCCATC CCCAAAAGCA AGCGGGTCTC
AACTTTGTTG GCCTGCATGT GCCGGTCGGT CGCCTGACAA CCGAAGACCT CTACGAGCTC
GCCCGTCTGG CCGACACTTA CGGTCAAGGG GAAGTGCGAC TGACCGTTGA GCAGAATGTC
ATCCTCACCC ACATTCCCGA TGCGCAGCTG CCCACTCTCC TCGCCGAGCC ACTGCTGACA
CGGTTCTCGC CCCAGCCAGC CCCCCTGAGC CGTGGCACCG TTTCTTGCAC GGGGTCTCAG
TACTGCAACT TTGCGCTGAT TGAAACAAAG CAACGAGCGA TCGCGATCGC CCAATCCCTC
GAAGCAGAAC TCGACCTGCC GCGACCAGTT CGCATCCACT GGACGGGCTG CCCCAACTCC
TGCGGTCAAC CGCAAGTCGC TGACATCGGC CTCATGGGAG CCAAGGTTCG CAAAGACGGC
CAGATGGTTG AAGGCGTTGA CATTTTCTTA GGCGGCAAGG TTGGCTACGA CGCCCACCTC
GGTGAAAAAG CGATGACCGG CGTCGCCTGC GAGGATTTGC CCGACGTGCT GCGCCAACTG
TTGATCGAGC GATTTGGGGC TCAAGCGCGA TCGCACTAG
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| Protein sequence | MAQATATTEK LNKFEKLKLE KDGLAVRDQI QHFASIGWEA MDPGDREHRL KWLGIFWRPV
TPGRFMARLR IPSGILQSQQ LNALANFLQR YGDQASIDIT TRQNLQLRGL LLEDTPEFLE
RLHAVGLTSV QSGMDNVRNI TGSPVAGLDA AELFDTRSLI QALQDDLTAA GQGNSEFTNL
PRKFNIAIEG GRDNSIHAEI NDLAFTPAYQ DGTLGFNVWV GGFFSSTRVA PAIPLNAWVP
ADHSVIRLSR AILEVFRDNG SRGNRQKTRL MWLIDEWGIE RFRQVVSEAY GAPLAAAAPE
LMDWEKRDFL GVHPQKQAGL NFVGLHVPVG RLTTEDLYEL ARLADTYGQG EVRLTVEQNV
ILTHIPDAQL PTLLAEPLLT RFSPQPAPLS RGTVSCTGSQ YCNFALIETK QRAIAIAQSL
EAELDLPRPV RIHWTGCPNS CGQPQVADIG LMGAKVRKDG QMVEGVDIFL GGKVGYDAHL
GEKAMTGVAC EDLPDVLRQL LIERFGAQAR SH
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