Gene Synpcc7942_1196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1196 
Symbol 
ID3774432 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1224298 
End bp1224534 
Gene Length237 bp 
Protein Length78 aa 
Translation table11 
GC content59% 
IMG OID637799623 
Producthypothetical protein 
Protein accessionYP_400213 
Protein GI81300005 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.138006 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTTTG CAATCGGCGA TCGCGTCCGC TTGGCCGCTC AGCCACCCTA CCTAAAAAGT 
GCTGACCCGT TGCCGATGCT GCGGCCGCCC GACTTGCTAG CAGTCGGTGA ACAGGGAACG
ATCACGGGCC TCCGTCCCGG TGGCTACTGG GTAGTGCTGT TTGATCGCGG CTCTTTTCTG
CTGGATACGC AGTTCCTGTC CAAGGTGGAA TCGGGCGCTA GTAGTAGCGA AGGTTAG
 
Protein sequence
MDFAIGDRVR LAAQPPYLKS ADPLPMLRPP DLLAVGEQGT ITGLRPGGYW VVLFDRGSFL 
LDTQFLSKVE SGASSSEG