Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1173 |
Symbol | |
ID | 3775479 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 1207866 |
End bp | 1209134 |
Gene Length | 1269 bp |
Protein Length | 422 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637799600 |
Product | hypothetical protein |
Protein accession | YP_400190 |
Protein GI | 81299982 |
COG category | [M] Cell wall/membrane/envelope biogenesis [S] Function unknown |
COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis [COG3222] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCAGC GCCTGATTCT CTTTAGTCGC TATCCCGAAC CTGGGCGATC GAAGACGCGG CTGATTCCGG CACTGGGACC CGAGGGAGCA GCTGATCTAC AGCGCCAGTT GACGGAGTGG ACGGTGTTTA CGGCCCATTG CTGGCAAGCG CGATCGCCCC AAACTGAAGT GCTGATCGCC ACCAGTGGCG GCACATCCGA GGCTTGGCAG CAGTGGCTAG GAGCGGTTGA GGTGCAGCCT CAAGCCGAGG GGGATTTGGG CGATCGCCTG CATCAAGCGT TTCAGGATTC ATGGCAAGTA GGCTGCGATC GCACCGTGAT CATCGGCAGT GATTGTCCTC AAATCGAGCC CCATCATCTG GACGAGGCGT TTGCGGCTCT CCAGCAAGCG GATGTCGTGA TTGGACCCGC AAGTGACGGC GGCTATTGGC TGATCGGTCT GAGTCAACCC CAACCCCAAC TGTTTCAAAA CATTGACTGG GGTAGCGATC GCGTCTTGGT ACAAACCCTA GAAGCTGCTC AAGTAGCAGA TCTCCAAGTC GCACAGCTCG AATCCCTCTC CGATCTTGAT CGCCCTGAAG ATCTCAATCT CTGGCAACCC CAGCCGCAAC TGTCGGTGAT TATCACCACC CTCAATGAAG CAGCAAACCT GCCCCAAACT TTGGCTTCGA TCGGGGATGC CCCGGTAGAG ACTTTAGTCG TCGATGGTGG CAGTCAAGAC GCAACAGTTG CGATCGCCCA AGCTTGGGGA GCCAAGGTGA TTCATAGCCC TGCTGGACGG GGGCGACAGT TCAACCAAGG TGCCGCAGCA GCCCACGGCA ACATCCTGCT TTTCCTGCAC GGCGATACCC GTCTACCCCC CCGCTTTTGG GAGCATGTGC TGCAAACATT GCAACCGCCG CAGGTAGTCG CTGGGGCATT TCAGCTCCAA ATCGATAGCC CAGACTGGCG CTTACGCTGG ATTGAACGGG GTGTGCGTTG GCGGAGCCAC TGGCTACAGC AACCCTACGG CGACCAAGCC CTATTTCTCA GTCGTGATCG CTGGCGAGCG ATCGGTGGTT TCAGTACAGG GCCGCTGTTG GAAGACTATC GCTTCGTGCG GCAACTGCGT CGCCAAGGCA CAATTGCGAT CGCCTCAGCG GCTGTGATGA CTTCTGCTCG ACGCTGGCAA CGACGCGGAG TGCTGCAAAC AACGTTGCTC AATCAGCTGA TCCTACTGGC GCACCATTGT GGGGTCAGCG ATCAACAACT GGCTCGCTGG TATCGCTAA
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Protein sequence | MSQRLILFSR YPEPGRSKTR LIPALGPEGA ADLQRQLTEW TVFTAHCWQA RSPQTEVLIA TSGGTSEAWQ QWLGAVEVQP QAEGDLGDRL HQAFQDSWQV GCDRTVIIGS DCPQIEPHHL DEAFAALQQA DVVIGPASDG GYWLIGLSQP QPQLFQNIDW GSDRVLVQTL EAAQVADLQV AQLESLSDLD RPEDLNLWQP QPQLSVIITT LNEAANLPQT LASIGDAPVE TLVVDGGSQD ATVAIAQAWG AKVIHSPAGR GRQFNQGAAA AHGNILLFLH GDTRLPPRFW EHVLQTLQPP QVVAGAFQLQ IDSPDWRLRW IERGVRWRSH WLQQPYGDQA LFLSRDRWRA IGGFSTGPLL EDYRFVRQLR RQGTIAIASA AVMTSARRWQ RRGVLQTTLL NQLILLAHHC GVSDQQLARW YR
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