Gene Synpcc7942_1148 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1148 
Symbol 
ID3775098 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1172695 
End bp1173912 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content53% 
IMG OID637799574 
Productmetal dependent phosphohydrolase 
Protein accessionYP_400165 
Protein GI81299957 
COG category[T] Signal transduction mechanisms 
COG ID[COG2206] HD-GYP domain 
TIGRFAM ID[TIGR00277] uncharacterized domain HDIG 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCCTG AAGAACTGCA ACAAGAGTTA CAGCTGCAAT CGATGCTAAT CGATCGCTCG 
GAGCATGCAC TCTTGACCCT GAAAGCTTGC AATGAGGCCT TGGTCAGGGC TTCAGGAGAA
CGAGAGTTTC TGGCTGAGTT TTGTCGTCTC TGTGTGGTTG AAGCTGGCTA TGCCCACGCT
TGGGTGACGC TCAATAGCTT TAATCCCCAT GAAAGTCTCC GCCCCTTTGC AAGCTTTGGC
AGACTGCAGT CCTACGTCGA CAGCCTACAA ATTACTTGGG ATGACCAAGC AACTGGGCAG
GGGCCAACTG GGCAAGCAAT CAAAACTGGA CAGATTCAAA TTGCCGATTG GCAAGCGGAG
CAATCCAGCT TGGCTCCATG GCAAGAAATT GCCACTCACT ATCAGATCAA AACCAGTATT
TCCTTGCCTC TTAAGCAGGG TGTTCGTACT TTAGGAGCCC TCAATATTTA CAGTACACAG
CCCGATGCTT TTCCCCCACT TGAGCAGGAG CTTTTGGCCC AAGTTGCCCA ATTGTTGGCC
TATGGCTTGA GTAGCCGCCG TAGCCTTGCC ATTCAAGATC GCCTGCTTGA CCAGACCATT
CAGGCGATCG TGCAGATGGT TGAACTGCGC GATCCTTATA CCCAAGGCCA TGAGAACCAA
GTTGCTCAAT TAGCCCAGGC GATCGCTCGG CAATTGGGCC TAGATGAGAA CTGCATCCGT
GGCATCCATG TGGCAGGACT CCTGCACGAT GTCGGCAAGA TTCGCGTGCC CGCTGAAATC
CTCTCTAAAC CGGGTTGTTT AGATCCGATT GAGTACGAGT TGATTAAGCT GCATCCCCAA
GCGTGCTACG ACATTCTCAA AAGCATCCAG TTTCCATGGC CGGTGGCAGA GATTGCTATG
CAGCACCATG AGCGACTGGA TGGTTCGGGC TATCCACGGC AGCTGCGCGG CAAACAGATT
TTGCTGGCCG CTCGCATTAT CGCAGTGGCT GATGTGATTG ATGCCATGAT CAGCCACCGC
CCCTACCGGC CTGGGTTGGG GTTAGGAGTG GCAATCGCCG AAATTAAGAA CAACAGTGGG
CGTCTCTACG ACCCGAGGGT AGTGGAGGCT TGCCTAGCGG TTTTGAATAT GTCTGATGCT
CTAGAAACAG AGCCAACCTC CCCTCCCCCA TTCCAAACAG GCGATCGCTT AGCCAAGGGA
GGACCAAAAG GCGGATAG
 
Protein sequence
MSPEELQQEL QLQSMLIDRS EHALLTLKAC NEALVRASGE REFLAEFCRL CVVEAGYAHA 
WVTLNSFNPH ESLRPFASFG RLQSYVDSLQ ITWDDQATGQ GPTGQAIKTG QIQIADWQAE
QSSLAPWQEI ATHYQIKTSI SLPLKQGVRT LGALNIYSTQ PDAFPPLEQE LLAQVAQLLA
YGLSSRRSLA IQDRLLDQTI QAIVQMVELR DPYTQGHENQ VAQLAQAIAR QLGLDENCIR
GIHVAGLLHD VGKIRVPAEI LSKPGCLDPI EYELIKLHPQ ACYDILKSIQ FPWPVAEIAM
QHHERLDGSG YPRQLRGKQI LLAARIIAVA DVIDAMISHR PYRPGLGLGV AIAEIKNNSG
RLYDPRVVEA CLAVLNMSDA LETEPTSPPP FQTGDRLAKG GPKGG