Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1088 |
Symbol | |
ID | 3775038 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 1104193 |
End bp | 1104570 |
Gene Length | 378 bp |
Protein Length | 125 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637799514 |
Product | plastocyanin |
Protein accession | YP_400105 |
Protein GI | 81299897 |
COG category | [C] Energy production and conversion |
COG ID | [COG3794] Plastocyanin |
TIGRFAM ID | [TIGR02656] plastocyanin |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00000603452 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAAAGTTT TGGCTTCTTT TGCACGCCGC CTCAGCCTCT TCGCTGTTGC TGCTGTGCTC TGCGTCGGTA GCTTCTTCCT CTCGGCAGCA CCGGCATCTG CTCAGACCGT TGCGATCAAA ATGGGCGCAG ACAACGGCAT GCTGGCGTTT GAACCCTCGA CCATCGAGAT CCAAGCGGGC GACACGGTCC AGTGGGTCAA CAATAAACTG GCGCCCCACA ACGTTGTGGT CGAGGGCCAA CCGGAACTCT CTCACAAAGA TCTCGCCTTC TCGCCTGGCG AAACCTTTGA AGCTACCTTC AGCGAGCCTG GCACCTACAC CTACTACTGC GAGCCCCACC GCGGCGCTGG CATGGTTGGC AAAATCGTGG TCCAGTAA
|
Protein sequence | MKVLASFARR LSLFAVAAVL CVGSFFLSAA PASAQTVAIK MGADNGMLAF EPSTIEIQAG DTVQWVNNKL APHNVVVEGQ PELSHKDLAF SPGETFEATF SEPGTYTYYC EPHRGAGMVG KIVVQ
|
| |