Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_0982 |
Symbol | |
ID | 3775371 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 991553 |
End bp | 992167 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637799401 |
Product | hypothetical protein |
Protein accession | YP_399999 |
Protein GI | 81299791 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2867] Oligoketide cyclase/lipid transport protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.499344 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.101871 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCTGCT CCTCGCAGAG ACCCGCGACC TCCGCTAGGC TGGAAGAGCG ATTCCGTTCA AGAGACGACG ACGTGAGTCC TCTGTCGCTG AGTTTTCCCG CCCTGCACCG TTCTCCGCAG CAAGATGTGC AGATCGACGC CCACTCCCTT GGCCCTCGCC AGCGGCGGAT TCAAGTCCAA ATTGAAGTCC CTGTTGCGAT CGCTGATCTC TGGGCGTTGT TGACGGACTA CAACCGTCTG GCAGAGTTCA TTCCCAACCT CTCGATCAGT CAGCGATTGC CGACGAGTGA TGGTTCGATT CGGCTGGAGC AGGTTGGCAG CCAATGTTTT CTGCGTTTTC GCTTCTGTGC GCGGGTTGTT TTAGCCATGC AAGAGTCGCC CTACGAGTGC TTGGCATTTC AGATGATCGA GGGGGATTTT GAACAGTTTG ACGGTAGCTG GCGGTTTCAA TCCGTAGACG CAGATCGCAC CCAGCTGACC TATGACGTCA CACTCTCACC CAAGCTGCCC ATGCCGATCC AGCTAATTGA GACTCAACTG GACCAGAATC TTGCTGCCAA TTTATTGGCA ATTCGGGAAG AAGCTATCCG TCGCTTTGTC AGCGATCGCG CCTGA
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Protein sequence | MLCSSQRPAT SARLEERFRS RDDDVSPLSL SFPALHRSPQ QDVQIDAHSL GPRQRRIQVQ IEVPVAIADL WALLTDYNRL AEFIPNLSIS QRLPTSDGSI RLEQVGSQCF LRFRFCARVV LAMQESPYEC LAFQMIEGDF EQFDGSWRFQ SVDADRTQLT YDVTLSPKLP MPIQLIETQL DQNLAANLLA IREEAIRRFV SDRA
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