Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_0821 |
Symbol | |
ID | 3775999 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 814476 |
End bp | 816077 |
Gene Length | 1602 bp |
Protein Length | 533 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637799238 |
Product | periplasmic oligopeptide-binding |
Protein accession | YP_399840 |
Protein GI | 81299632 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTCTGC GTCAACTGTT GCTGGGCTGT CTGCTGCTCT TCTGGCTCTG TGTAGGGCTG GTGGGCTGTG TGGCGCTCCC AAAGGCGATC GAGAGCGATC GCATTGTGGT GGGAACGGCA GCGCGACTGC GAACTCTGGA TCCCGCCGAT GCCTATGAAC TGCTTTCGGG AGCTTTGCTC TATGCCCTCG GCGATCGCCT CTATACAACG CGACCCGATA GCGTTGAAAT CGTGCCGCAA CTGGCAACGG CTCTGCCAGA GATCAGTCCG GATGGCCTGA CCTATCGCAT TCCCCTGCGG CAGGATGTGC GCTTCCACGA CGGCAGCCCG TTTAATGCGG CGGCCATGGC CTTCTCTCTG CAACGCTTCA TCAAAAACGG TGGCCGCCCT TCCTATTTGC TGGGCGATCG CGTGGCCTCC ATTCAGGCAA CTGGCGATTA CGAGCTGACG ATTCAGCTCA AAGCTCCCTT TGCACCCTTC CTCGCCCTGC TGACCTTCCC GGGCCTCTGT GCAGTTTCGC CGCAAGCCTA TCAACCGGCT GCCGGACAAT TTCTACCGCA GCAATTTGTC GGCACTGGCC CCTATCGTCT GGAATCATTT CAGGGCGATC GCCTGCGACT GGCGGCCAAT CGTGACTACT GGGGCGAGAA ACCCCGCAAC GAAGGTCTCG ATATTCAGAT TTTCTCCAGC CCCTCCAATC TCTACAGTGC TCTAGGGACT GGCTTAGTCG ATGTCGCCTA TCAGGGCTTG GATGCCGAAC AAATTCGGGG ATTGCGCCAG CAGGCCGCTG AGGGCCGAAT TCAAATCAAC AATAACGATG GCCTTGGCAT TTATTACCTA ACGGTCAACG TCCTCAGCCC GCCCCTCGAT CGCCCTGAGG TGCGGCAAGC CCTTGCACTG GCGATCAACC GCGATGTGAT CCGCGATCGC GTTTTCTATG GACAGGTGCA ACCCCTCTAC AGCTTGGTTC CTTCGGAGTT TCCGGTTTCG GAGCCGGATT TTCCGCGCAA CAATCCGGAG CAAGCCCGAG CGGTATTAAC AGCCGCAGGC TATTCCTCCA GCAAGCCGCT CAAGCTCGAT CTCTGGTATC GCTCCAATCT CAATAGCAAT GTCTTGGCTG CCAGTACCCT GCGTGCTTCA GTCCAGCAGC AACTAGACGG TTTGATTGAC CTGCAGCTGC AGGGTGTGGA ATCGACCACG GCCTACGAAA ATCTGGAGAA AGGTGCCTAT CCCCTATTTT TGCTCGACTG GTTGCCCGAC TTTCTGGATG CCGATAACTA CTTGCAGCCT TTTCTCGCTT GTAGCCAGGG CAATCCGCAG CAGGGCTGTC AGTCCGGCAG CAGCTACTAT CAAGGCTCTT TCTACTACAG CGATCGCGCC AACCAACTGC TTCAACAAGC AGGAGAAAGT ACGGATCCCC AAGCTCGCGA TCGCCTGTTG CGGGAGCTTC AACAGCTCAG CGCTGAGGAT TTACCCTTCA TTCCGCTCTG GCAAAATCGC GAATATCTAT TCAGTCAGCC CTACATCCAG GGTGGCAATA TTCGAGCCTC GGGGGCGATC GCCTTTGGCC AACTTCGCAA GGTGAAAAAT GTCGCGCGCT AG
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Protein sequence | MRLRQLLLGC LLLFWLCVGL VGCVALPKAI ESDRIVVGTA ARLRTLDPAD AYELLSGALL YALGDRLYTT RPDSVEIVPQ LATALPEISP DGLTYRIPLR QDVRFHDGSP FNAAAMAFSL QRFIKNGGRP SYLLGDRVAS IQATGDYELT IQLKAPFAPF LALLTFPGLC AVSPQAYQPA AGQFLPQQFV GTGPYRLESF QGDRLRLAAN RDYWGEKPRN EGLDIQIFSS PSNLYSALGT GLVDVAYQGL DAEQIRGLRQ QAAEGRIQIN NNDGLGIYYL TVNVLSPPLD RPEVRQALAL AINRDVIRDR VFYGQVQPLY SLVPSEFPVS EPDFPRNNPE QARAVLTAAG YSSSKPLKLD LWYRSNLNSN VLAASTLRAS VQQQLDGLID LQLQGVESTT AYENLEKGAY PLFLLDWLPD FLDADNYLQP FLACSQGNPQ QGCQSGSSYY QGSFYYSDRA NQLLQQAGES TDPQARDRLL RELQQLSAED LPFIPLWQNR EYLFSQPYIQ GGNIRASGAI AFGQLRKVKN VAR
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