Gene Synpcc7942_0703 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0703 
Symbol 
ID3775873 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp694072 
End bp695280 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content56% 
IMG OID637799115 
ProductDNA processing protein DprA, putative 
Protein accessionYP_399722 
Protein GI81299514 
COG category[L] Replication, recombination and repair
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0758] Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake 
TIGRFAM ID[TIGR00732] DNA protecting protein DprA 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.055587 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.280141 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTTGC TTGATTCTGT TGCACCGCTG CGATCGCGCT TGCAAGAATC CTCGACGGCT 
TGGGCCAGTC CTGATCCGGA GTCCCTCTAC TGTCTTGCCC TGTCACATGT GCCACGCCTA
GGGCCAGCCT TGCTCCGGCG GTTGCTGATG CACTTTGGTT GCTTTGAAGC TGCTTGGGAA
GCACCAACAA CTGCACTACT GGAAGTCGAT GGGATCGGGT TGTTGTTGGC AGAAGCGATC
GCAACTGTCA GACAGCAGCA CCAGCCAGAA GCTTTGTGGG AGCAGCACCA GCGCCAAAAT
CCTCATTTTT TACTGTGGAC TGATCCGGCC TATCCGCGCC TCTTACGTGA AATTCCCACG
CCACCGCCTG TCCTTTACTA CCGAGGCAAC TTAGACCTGA TTCAACCGCC GCTGGACGCT
GTCGCGATCG GGGTTGTGGG CACTCGTGAC CCCTCGCCCT ACGGTCGTCG CTGGACTGGC
AAGTTAAGTG GTGCGATCGC CCAAGCCGGT TACACCGTGA TTTCTGGCTT GGCCTACGGC
GTGGATACGG AAGCCCATCA AGCTTGTCTG GAAGCGCGGG GCAAAACCGT GGCAGTGCTC
GGCACTGGCG TCAATGTGAT CTATCCGCCG CAGAACCGCG CCTTGTACGA GGCGATTTTG
GAGCAAGGTG GATTAATTCT GAGTGAGCAG CCCAGCGGCA CGCAACCCGA TCGCGGCTCT
TTTCCTGCCC GCAATCGCAT CATTGCGGGT CTCAGTCGGG CACTGTTAGT GACAGAAGCG
CCAGGTCGAT CAGGTGCGTT GATTACAGCT CATCTCGCGA ATGAATTCTG TCGAGATGTC
TACATCTTGC CCAATAGTTT AGATAACCCT AAAGCAGCAG GTTGCCTGAG TTTAATTCAA
CAGGGTGCGC AACCAATTTT AGGCTCCGGT CATCTCCTCG ACTGGCTGCG GCAGTTGCCA
CCCCTCGATC CACAGTCCCC GCCCCTGATG CCCTCAGCAG TGCCGAGTCA AGAAGTAGAA
GAAGCGATCG CTGATCTCAG TCCTGAACAA GCACAGGTCT ATGCCCTGTT AAGCGACCAG
CCGATCAGCA AAGATGACAT TGTCGAGCAA TCGGGGCTGG ACTTTCATCA GGTTCAAATT
CACTTGACTC ACTTAGAAAT CTTGGGCTTA GCTGAGGTCT TACCGAGCGA TCTTTGTCAG
CGTTGCTAG
 
Protein sequence
MTLLDSVAPL RSRLQESSTA WASPDPESLY CLALSHVPRL GPALLRRLLM HFGCFEAAWE 
APTTALLEVD GIGLLLAEAI ATVRQQHQPE ALWEQHQRQN PHFLLWTDPA YPRLLREIPT
PPPVLYYRGN LDLIQPPLDA VAIGVVGTRD PSPYGRRWTG KLSGAIAQAG YTVISGLAYG
VDTEAHQACL EARGKTVAVL GTGVNVIYPP QNRALYEAIL EQGGLILSEQ PSGTQPDRGS
FPARNRIIAG LSRALLVTEA PGRSGALITA HLANEFCRDV YILPNSLDNP KAAGCLSLIQ
QGAQPILGSG HLLDWLRQLP PLDPQSPPLM PSAVPSQEVE EAIADLSPEQ AQVYALLSDQ
PISKDDIVEQ SGLDFHQVQI HLTHLEILGL AEVLPSDLCQ RC