Gene Synpcc7942_0678 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0678 
Symbol 
ID3775661 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp672767 
End bp673402 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content56% 
IMG OID637799090 
Product3'-5' exonuclease 
Protein accessionYP_399697 
Protein GI81299489 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0349] Ribonuclease D 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTAGCA TCGACTCAGA CTTTCATCTG TGTGAACAAG ACTTAACAGA TGAGTTGCTA 
GCGCAATATC GGCAGTCCCC TGCGATCGCC ATCGACACCG AGGCAATGGG GCTGAATTTC
CACCGCGATC GCCTTTGCCT AGTGCAACTC TGCGATTCAG CGGGAATTAC AACCTGCGTG
CGCATCGCCC AAGGGCAAAC CGTCGCCCCG AATTTGCAAG CCCTCTGCGA GGATCCGCAA
ATTACCAAGG TCTTCCACTT CGCCCGCTTC GACATCACCG CCCTCAAGCA TGGCCTTGGG
ATTGCGGTTC AGCCCATTTT TTGCACCAAG ATCGCCAGCA AACTAGCACG CACCTATAGC
TCACAGCACG GCTTAAAAAG CCTGCTCCAG GAGTTGGTGG GTGTCGAGCT GGACAAGACA
GCCCAAAGTT CTGACTGGGG CAATGCTGCA GCGCTCTCCC ATGAGCAGAT GCGCTACGCC
TGCAATGACG TGCGCTATCT CTTGGCTGCT CAGGCAAAAT TGACGACGAT GCTGCAGCGT
GAAGGTCGCT GGCAGTTGGC CCAAGATTGC TTTGCCTGTC TTCCCACCTT CGCGGCCCTC
GATCTGGCCC AGTTTGGCAG TGTGTTTGAG CACTAG
 
Protein sequence
MSSIDSDFHL CEQDLTDELL AQYRQSPAIA IDTEAMGLNF HRDRLCLVQL CDSAGITTCV 
RIAQGQTVAP NLQALCEDPQ ITKVFHFARF DITALKHGLG IAVQPIFCTK IASKLARTYS
SQHGLKSLLQ ELVGVELDKT AQSSDWGNAA ALSHEQMRYA CNDVRYLLAA QAKLTTMLQR
EGRWQLAQDC FACLPTFAAL DLAQFGSVFE H