Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_0678 |
Symbol | |
ID | 3775661 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 672767 |
End bp | 673402 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637799090 |
Product | 3'-5' exonuclease |
Protein accession | YP_399697 |
Protein GI | 81299489 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0349] Ribonuclease D |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTAGCA TCGACTCAGA CTTTCATCTG TGTGAACAAG ACTTAACAGA TGAGTTGCTA GCGCAATATC GGCAGTCCCC TGCGATCGCC ATCGACACCG AGGCAATGGG GCTGAATTTC CACCGCGATC GCCTTTGCCT AGTGCAACTC TGCGATTCAG CGGGAATTAC AACCTGCGTG CGCATCGCCC AAGGGCAAAC CGTCGCCCCG AATTTGCAAG CCCTCTGCGA GGATCCGCAA ATTACCAAGG TCTTCCACTT CGCCCGCTTC GACATCACCG CCCTCAAGCA TGGCCTTGGG ATTGCGGTTC AGCCCATTTT TTGCACCAAG ATCGCCAGCA AACTAGCACG CACCTATAGC TCACAGCACG GCTTAAAAAG CCTGCTCCAG GAGTTGGTGG GTGTCGAGCT GGACAAGACA GCCCAAAGTT CTGACTGGGG CAATGCTGCA GCGCTCTCCC ATGAGCAGAT GCGCTACGCC TGCAATGACG TGCGCTATCT CTTGGCTGCT CAGGCAAAAT TGACGACGAT GCTGCAGCGT GAAGGTCGCT GGCAGTTGGC CCAAGATTGC TTTGCCTGTC TTCCCACCTT CGCGGCCCTC GATCTGGCCC AGTTTGGCAG TGTGTTTGAG CACTAG
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Protein sequence | MSSIDSDFHL CEQDLTDELL AQYRQSPAIA IDTEAMGLNF HRDRLCLVQL CDSAGITTCV RIAQGQTVAP NLQALCEDPQ ITKVFHFARF DITALKHGLG IAVQPIFCTK IASKLARTYS SQHGLKSLLQ ELVGVELDKT AQSSDWGNAA ALSHEQMRYA CNDVRYLLAA QAKLTTMLQR EGRWQLAQDC FACLPTFAAL DLAQFGSVFE H
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