| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_0633 |
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| Symbol | rplA |
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| ID | 3775616 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | - |
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| Start bp | 625078 |
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| End bp | 625791 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637799045 |
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| Product | 50S ribosomal protein L1 |
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| Protein accession | YP_399652 |
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| Protein GI | 81299444 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0081] Ribosomal protein L1 |
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| TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.238472 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.846201 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCGTA AAGTTTCTCG TCGTCTGCAA GAGCTGCAGA AGAAAGTTGA AGATCGAGCC
TACGAGCCTC TTGCGGCTCT GAACCTGCTC AAGGAAACGG CGACTGCCAA GTTTCCGGAG
TCGGCAGAAG CTCACATCCG TCTCGGCATC GATCCCAAGT ACACCGACCA ACAGCTGCGG
ACAACCGTTG CGCTGCCCAA AGGCACCGGT CAAACCATCC GCGTTGCTGT CATTGCCCGG
GGTGAAAAGG TCGCTGAAGC CAAGGCTGCA GGCGCTGACA TTGCCGGTTC TGAAGAACTG
ATCGAAGAAA TCAGCAAAGG CTTCTTGGAC TTTGACTTGC TGATCGCCAC ACCCGATGTG
ATGCCCCAAG TGGCTAAACT CGGTCGGCAA CTTGGTCCCC GCGGTCTGAT GCCCTCGCCC
AAAGGTGGCA CAGTCACTTT TGATCTTGAA CAGGCCATTA ACGAGTTCAA AGCTGGTAAG
CTGGAATTTC GTGCCGATCG CACCGGGATT GTGCACGTCC TGTTCGGTAA AGCCTCCTTT
TCGGCAGATG ACCTCTTGGC TAACCTTAAA GCCCTGCAGG AAACCATCGA CCGGAACCGT
CCTTCGGGCG CTAAAGGCCG TTACTGGCGG AGCGTTTACA TTTCGGCAAC CATGGGACCC
GCCATCGAAG TCGACATCAA CGCCCTGCGC GACCTGAAGC TGGCTGAAGC CTAA
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| Protein sequence | MTRKVSRRLQ ELQKKVEDRA YEPLAALNLL KETATAKFPE SAEAHIRLGI DPKYTDQQLR
TTVALPKGTG QTIRVAVIAR GEKVAEAKAA GADIAGSEEL IEEISKGFLD FDLLIATPDV
MPQVAKLGRQ LGPRGLMPSP KGGTVTFDLE QAINEFKAGK LEFRADRTGI VHVLFGKASF
SADDLLANLK ALQETIDRNR PSGAKGRYWR SVYISATMGP AIEVDINALR DLKLAEA
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