Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_0487 |
Symbol | |
ID | 3774725 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 473510 |
End bp | 474172 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637798894 |
Product | thylakoidal processing peptidase |
Protein accession | YP_399506 |
Protein GI | 81299298 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0681] Signal peptidase I |
TIGRFAM ID | [TIGR02227] signal peptidase I, bacterial type |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.0584817 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTAAAC CAGAAACGTC GTCTACTTCC ACGGCTAGCT CTGACACCCC TAGCCCGAAG AAGGAGAACG TCTGGCTCGA GAATGCCAAA ACCCTCGGAC TGAGCATCAT TTTTGCCCTA GGGATTCGGC AGTTCGTCGC CGAGGCTCGC TACATTCCCT CGGGTTCGAT GCTGCCTACC CTGCAGATCA ACGATCGCCT GATCATTGAC AAGGTTAGCT ATCGCTTCAA TCCGCCGCAG CGGGGCGACA TCATTGTCTT TGAACCGCCC TTTGCTTTGC GGAAACGGGG CTACGACGAT GCTTTTATCA AACGGGTGAT TGGCCTCCCC GGCGACACTG TCGAAGTCCG AGATGGCCAA GTTTATGTCA ATGGCAAAGT CCTGAATGAG AATTACATCG CCCAAGAGCC CAGCTACACC TGGGGACCCA AAACCGTGCC TGCCAATAGC TACCTTGTGT TGGGCGACAA CCGCAACAAC AGCTACGACA GCCACTATTG GGGATTTGTC CCGGAAAACA AAATCATCGG TAAAGCCCTC GTGCGTTTTT GGCCGCTCAA CCGCTTGGGG GAAGTAGAAC CTCTGCCCAG CTACCAAAAA ACGCCACCCA TCACGCCCCT AGGCTGGCGG TTGCCACACC CGACCCACCA GCGTTTGTCC TAG
|
Protein sequence | MAKPETSSTS TASSDTPSPK KENVWLENAK TLGLSIIFAL GIRQFVAEAR YIPSGSMLPT LQINDRLIID KVSYRFNPPQ RGDIIVFEPP FALRKRGYDD AFIKRVIGLP GDTVEVRDGQ VYVNGKVLNE NYIAQEPSYT WGPKTVPANS YLVLGDNRNN SYDSHYWGFV PENKIIGKAL VRFWPLNRLG EVEPLPSYQK TPPITPLGWR LPHPTHQRLS
|
| |