Gene Synpcc7942_0419 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0419 
Symbol 
ID3773364 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp408941 
End bp409903 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content60% 
IMG OID637798825 
Productbiotin synthase 
Protein accessionYP_399438 
Protein GI81299230 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0502] Biotin synthase and related enzymes 
TIGRFAM ID[TIGR00433] biotin synthetase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.22535 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGCTA TCCGCCACGA CTGGACTCTC GAAGAAATCG AAGATCTCCT CAACACGCCG 
CTCCTCGAGT TAGTTCATCG CGCGCAGACG GTTCACCGCG ACTATCAACC GGCTAACGCC
ATCCAACTGG CGACCTTGCT CAGCGTCAAG ACCGGCGGTT GCAGCGAAAA CTGCGCCTAC
TGCCCTCAGT CGGCTCACTA CAACACTGAG GTCGATCCTC AGTCCACCCT GCCAATCGAA
ACGGTTTTAG AACAGGCAGA ACGGGCCAAG GCCGCTGGTG CCAGTCGTTT TTGCATGGGC
TGGGCTTGGC GGGAAATCCG GGATGGGGCG CAGTTCGACG CCATGCTGGA AATGGTGCAA
GGCGTCCGCC AATTAGGACT CGAAGCTTGC GTCACCGCTG GTATGCTCAG CGATCGCCAA
GCGGAACGGC TGGCTGAGGC TGGTTTGACG GCCTATAACC ACAACCTCGA CACCAGCCCC
GAGTTCTACG GCGAGATTAT TTCGACGCGC ACCTATGCCG ATCGCCTTGC CACGCTGGAA
CGGGTGCGGC AGGCCGGCAT TAGTGTTTGC TGCGGCGGCA TCATTGGCAT GGGAGAAGGG
CAGCGCGATC GCGCCGGATT GCTGCAGGTA CTCGCAACCC TCAATCCTCA TCCCGAAAGT
GTGCCAATCA ATGCCCTAGT GCCAGTTGAA GGAACGCCTT TAGGCGATCG CGATCGCCTC
GATCCGTTGG ATTTGGTGCG GATGTGCGCC GTCGCTCGGA TTTTGATGCC CAAAGCGCGG
GTTCGCCTCA GTGCGGGTCG CACCGCCCTC AGCCGCGAAG CCCAAGTCCT TTGCTTCCTG
GCAGGGGCTA ACTCGATCTT CTACGGCGAT ACCTTGCTGA CCACAGCGAA TCCTGTCTGT
GAGGCCGATC GCCAACTGCT CGCCGACATC GGTGCCGAAG CGCTTGAAGT GGTGACGGCT
TAG
 
Protein sequence
MEAIRHDWTL EEIEDLLNTP LLELVHRAQT VHRDYQPANA IQLATLLSVK TGGCSENCAY 
CPQSAHYNTE VDPQSTLPIE TVLEQAERAK AAGASRFCMG WAWREIRDGA QFDAMLEMVQ
GVRQLGLEAC VTAGMLSDRQ AERLAEAGLT AYNHNLDTSP EFYGEIISTR TYADRLATLE
RVRQAGISVC CGGIIGMGEG QRDRAGLLQV LATLNPHPES VPINALVPVE GTPLGDRDRL
DPLDLVRMCA VARILMPKAR VRLSAGRTAL SREAQVLCFL AGANSIFYGD TLLTTANPVC
EADRQLLADI GAEALEVVTA