Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_0411 |
Symbol | trpA |
ID | 3773356 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 402191 |
End bp | 402991 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637798817 |
Product | tryptophan synthase subunit alpha |
Protein accession | YP_399430 |
Protein GI | 81299222 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0159] Tryptophan synthase alpha chain |
TIGRFAM ID | [TIGR00262] tryptophan synthase, alpha subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACTGCAA TTTCTGACTG CTTTGCCGCC CTGCGATCGC AGGGACGCTG TGCATTGATC CCGTTTTTGA CGGCGGGCGA CCCGGATTTA GAAACCACCC GTCAGGCATT GCTGGCCCTC GATCGGGAAG GTGCTGACCT GATCGAGTTG GGTGTGCCCT ACTCTGATCC GCTGGCTGAC GGGCCCGTGA TTCAAGCAGC AGCAACGCGT GCCCTGCAAG CGGGGACGCG ACTGGATGAT GTCTTGGCAC TGCTCAAGGA CGTGCGATCG CAGATCAAAG CGCCGATTGT GCTGTTTACC TATTGCAACC CAATTCTGAA CCGCGGCTTC GAAGCCTTCT TGGATCAGAT CGCGGCAGCT GGCGCGAATG GTTTGGTTGT ACCCGATCTG CCCTTGGAAG AGTCCCAACG TCTCTCAGAA GTCGCAGCTG AGCGTGGCAT TGATTTGATT CTGCTGATTG CACCGACGAG TTCCGCTGAT CGCATTGCAG CGATTAGTAA GCAGGCTCGT GGCTTTATCT ACCTTGTCAG CGTCACCGGT GTCACTGGGA TGCGCCAAGG GATGCAGTCC CGTGTTGCGG ATCTCCTGCA AGAAATTCGC CAAGGGACTG ATAAGCCGAT CGGGGTTGGC TTCGGGATTT CGGGAGCAGA GCAAGCTCGA CAAGTGCGCG ATTGGGGCGC CGATGGTGTG ATCGTTGGCA GCGCCTTCGT GAATCGCCTG CAAGAGCAGG GCGTGGAAGG GGTGGCCACA CTCTGTCGGG AACTACGGCA GGCGATCGAT CGCCAACCCG TCCTGTCCTA A
|
Protein sequence | MTAISDCFAA LRSQGRCALI PFLTAGDPDL ETTRQALLAL DREGADLIEL GVPYSDPLAD GPVIQAAATR ALQAGTRLDD VLALLKDVRS QIKAPIVLFT YCNPILNRGF EAFLDQIAAA GANGLVVPDL PLEESQRLSE VAAERGIDLI LLIAPTSSAD RIAAISKQAR GFIYLVSVTG VTGMRQGMQS RVADLLQEIR QGTDKPIGVG FGISGAEQAR QVRDWGADGV IVGSAFVNRL QEQGVEGVAT LCRELRQAID RQPVLS
|
| |