| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_0405 |
|---|
| Symbol | |
|---|
| ID | 3773350 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus elongatus PCC 7942 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007604 |
|---|
| Strand | + |
|---|
| Start bp | 398870 |
|---|
| End bp | 399868 |
|---|
| Gene Length | 999 bp |
|---|
| Protein Length | 332 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637798811 |
|---|
| Product | DNA polymerase III subunit delta |
|---|
| Protein accession | YP_399424 |
|---|
| Protein GI | 81299216 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1466] DNA polymerase III, delta subunit |
|---|
| TIGRFAM ID | [TIGR01128] DNA polymerase III, delta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGTTT ACTACTTTTG GGGAGAAGAT GAATTCGCCC TGCGACAAGC GGTGGAAAAG
TTGCGCGATC GCAGCGTAGA TCCAATGTGG GCGAGTTTTA ACAGCGAGCG GATTCCCCCA
GAACAAGCAG ATGGGGTGCT GGTTGCTCTG TCGCTAGCAC TAACGCCACC CTTTGGGGCG
GGGCAACGCT TCATCTGGCT GCCGGAAACG CCCTTGGCCC AGCAATGTTC CGATGCGGTC
TATGCCGAGC TGACTCGCAC CTTGCCCCAA ATGCCCGAGA CAACGGTGTT GCTGTTCAGC
AGTACGGGTA AGCCAAATGG CCGACTGAAA TCCACTAAGC TACTGCAAAA AGTTGCGGAA
CTGAAGGAGT TCTCCCCCAT TCCTCCTTGG CGCGGTGAGG CGCTCGAGCA ACAGGTTGTC
CAAGTTGCCC ATGAGGTCGG CGTCCGTTTA GATCGCGAGG CAGTGGCTTG TTTGGCGGCA
GCGGTGGGCA ATCAAACCCG CCAGCTCTAC AGCGAACTGG AAAAGCTGAA ACTCTTCCAA
GGCGATCGCT CAGAGCCAGT GACAGCCCGC ACAGTCCAAG CCCTAGTCAG CACAACGACT
CAAAACAGCT TGCAACTGGC AGCTGCCATT CGCCAAGGGG ACTGCGATCG CGCCCTTAGC
TTGGTCAGTG ACTTGATCGC TAGCAACGAA CCAGCGCTGC GGATCAGTGC CACGCTGATT
GGTCAATTCC GCATGTGGCT CTGGGTCAAA CTGCTGCAGG AGCGGGGAGA ACGAGATCCG
CAAGCGATCG CCACGGCAGC GGGAATTGGA AATCCCAAGC GTGTCCATTT TGTTTTGCAA
GAAGTGCGAT CGCTCACCAG TCGTCAGCTA CAGCAAACCT TGCCCCTCTT GCTCGACCTC
GAATTTGGGC TCAAGCAGGG AGCGGATCCG CTTGGGCATT TACAATCCCA AGTGATTGCC
CTTTGCCAAT GCTGCCAACC CCCGCGATCG CGTCTGTAG
|
|---|
| Protein sequence | MPVYYFWGED EFALRQAVEK LRDRSVDPMW ASFNSERIPP EQADGVLVAL SLALTPPFGA
GQRFIWLPET PLAQQCSDAV YAELTRTLPQ MPETTVLLFS STGKPNGRLK STKLLQKVAE
LKEFSPIPPW RGEALEQQVV QVAHEVGVRL DREAVACLAA AVGNQTRQLY SELEKLKLFQ
GDRSEPVTAR TVQALVSTTT QNSLQLAAAI RQGDCDRALS LVSDLIASNE PALRISATLI
GQFRMWLWVK LLQERGERDP QAIATAAGIG NPKRVHFVLQ EVRSLTSRQL QQTLPLLLDL
EFGLKQGADP LGHLQSQVIA LCQCCQPPRS RL
|
|---|
| |