Gene Synpcc7942_0326 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0326 
Symbol 
ID3774847 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp322388 
End bp322873 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content56% 
IMG OID637798732 
Productallophycocyanin, beta subunit 
Protein accessionYP_399345 
Protein GI81299137 
COG category 
COG ID 
TIGRFAM ID[TIGR01337] allophycocyanin, beta subunit 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGACG CAATTACCGC TGTCATCAAT GCTTCTGACG TCCAAGGTAA GTACCTGGAC 
AGCTCAGCCC TCGATCGTCT CAAGAGCTAC TTCCAAAGTG GCGAACTGCG CGTCCGTGCT
GCAGCCACCA TCAGTGCCAA CTCGGCTCTG ATCGTCAAAG AAGCAGTGGC TAAATCGCTG
CTCTACTCAG ACATCACCCG TCCCGGCGGC AACATGTACA CCACCCGTCG CTATGCTGCT
TGCATCCGCG ACTTGGAGTA CTACCTGCGC TACGCCACCT ATGCCATGTT GGCTGGCGAT
ACCTCGATCT TGGATGAGCG CGTGCTCAAC GGTCTGAAAG AGACCTACAA CAGTCTGGGC
GTGCCGATCG GTGCAACCGT CCAAGCGATC CAAGCAATCA AAGAAGTCAC TGCTAGCTTG
GTCGGCCCCG ACGCTGGTCG CGAAATGGGT GTCTACCTCG ACTACATCAG CTCCGGCTTG
AGCTAA
 
Protein sequence
MQDAITAVIN ASDVQGKYLD SSALDRLKSY FQSGELRVRA AATISANSAL IVKEAVAKSL 
LYSDITRPGG NMYTTRRYAA CIRDLEYYLR YATYAMLAGD TSILDERVLN GLKETYNSLG
VPIGATVQAI QAIKEVTASL VGPDAGREMG VYLDYISSGL S