| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_0141 |
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| Symbol | secF |
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| ID | 3773481 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | - |
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| Start bp | 142618 |
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| End bp | 143562 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637798547 |
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| Product | preprotein translocase subunit SecF |
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| Protein accession | YP_399160 |
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| Protein GI | 81298952 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0341] Preprotein translocase subunit SecF |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGTTAC AACTCACGGC TCAGCGTCGG CGTTGGTGGT GGATTTCCGC CATTCTGGTC
ATCGTCAGCA TTGCGGGCAT GGCAATCTCG TGGCTGCAGT TTGGCGGTCC CGTGCGCCCC
GGCTTGGATT TTGTCGGGGG TACTCGTCTG CAGCTCGAGC GCGACTGTAC AAAAGCGCAA
TGCGATCGCC CGCTCGAAGC AGGAGCGATT CGGGAGGTTC TGACGTCGGC AGGACTGGAG
CGCAGCAACG TGCAAGTCAT CGGCCAAGAA CAACAGGGCT TTGTGATCAG CACGGGGGAC
TTGAGCCCTG AGGCGCGGAC TCAGCTCCAG AACAAACTAA GTGAGCAGTT TGGCCCCTTT
GACCCCCAGC AGACCCAAAT CGACACAGTT GGCCCAGTCC TGGGTCAGCA GCTCCTCAGC
TCAGGCCTTT TAGCACTGCT GGTATCCTTC GCCGGCATCT TGGTCTACCT GAACTTCCGG
TTTCAGCGCG ACTATGCTCT GCTAGCCATT CTGGCGCTCT TCCACGACGT GTTTATCACG
GCTGGGGTAT TCGCTTGGTT GGGTATCCTC GCTGGCTATG AAGCGGACAG TTTGTTCATT
GTTGCTTTGC TGACAATTAC CGGCTTCTCG GTCAACGACA CGGTGGTCAT CTACGATCGC
ATCCGCGAAA CGAATAGCCT TTTCCCAGAA GACGACATCG ACGAAATCGT CGATCTCTCG
GTCAACCAAA CCCTAGGGCG ATCAATCAAT ACAACCCTAA CTACCCTGTT ACCCCTCATC
TCGATCTATA TCTTTGGCGG AGCGACACTC CAGAACTTTG CCCTTGCCTT GATCGTCGGG
TTTGTTTTAG GAGCCTATTC GAGCATTTTC ATCGCCAGTA CCCTGCTAGG TTGGTGGCGT
AAACGCACGC CCCAATCGCC GCAACCCATC AATGCTGAAA CCTAA
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| Protein sequence | MTLQLTAQRR RWWWISAILV IVSIAGMAIS WLQFGGPVRP GLDFVGGTRL QLERDCTKAQ
CDRPLEAGAI REVLTSAGLE RSNVQVIGQE QQGFVISTGD LSPEARTQLQ NKLSEQFGPF
DPQQTQIDTV GPVLGQQLLS SGLLALLVSF AGILVYLNFR FQRDYALLAI LALFHDVFIT
AGVFAWLGIL AGYEADSLFI VALLTITGFS VNDTVVIYDR IRETNSLFPE DDIDEIVDLS
VNQTLGRSIN TTLTTLLPLI SIYIFGGATL QNFALALIVG FVLGAYSSIF IASTLLGWWR
KRTPQSPQPI NAET
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