Gene Synpcc7942_0121 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0121 
Symbol 
ID3773461 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp120013 
End bp121239 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content62% 
IMG OID637798527 
Producthypothetical protein 
Protein accessionYP_399140 
Protein GI81298932 
COG category[S] Function unknown 
COG ID[COG4370] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03492] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTTGC TCTGTCTTAG CAACGGTCAC GGCGAAGATC AGATTGCGAT CCGCATCCTG 
ACGGAGCTGC GCCAACTTGA ACCGGATTGG GCGATCGCGG CGCTCCCGCT GGTGGGCGAG
GGTCATGCGT TTGCGGCTGC CCAGATTGCA CGAATTGGCC CTCGACAGGT GCTGCCCTCC
GGCGGTTTTC TCAATCAAGA CTGGCGGCAA TTGCTGCGCG ATTTGGCAGG TGGCCTAACG
GGACTGACCT TTGGGCAATG GCAGGCCGTG CGGCAGTGGT CCGAGTCGGG TAGCGCGGTG
CTGGCGGTTG GCGATATTGT GCCGCTGCTG TTTGCCTGGG CCAGCGATCG CCCCTTTGCT
TTTGTGGCGA CAGCGAAGTC GGACTACTAC TGGCGGGATG AACAGGGGCT GTTGCCGATC
TCGAATCCGA CAATGCTGTG GTCGCGCTGG CAGCGCAGCT ACTTTGACCC TTGGGATCGC
TGGTTGATGA AGCATCCGCG CTGTCGAGCC GTTTTCCCAC GCGATCGCCT GACGGCTGAG
GGGTTACAGC AGCTTGGGGT ACCGGCGATC GCAGTCGGTA ATCCGATGAT GGACGGCCTC
GAGGCACCGG AAGCTGCAGC TTGGTCCCCC CTTTTGCCGA CGGGATCGCG TTGGTTGCTG
TTGCCAGGTT CTCGGCCGCC GGAAGCTCAG CGAAATTGGT CGCAGATCAT TGATGCACTG
CCGGTTGATC CCGACCGCGC TTTTGTGGCG TTGGCGGCGA TCGCGCCTTC CTTGCCGCTA
GCGGAGTTCA CGCAAGGTCT CAGCGATCGC GGTTGGCAAC CTGCGGCTAG TCCGATTCCC
GAGGCGATCG CCTTTCAAAA AGGAGCAGGT TGGTGCCTAC TGGGGCAGCG GAATTTCGCG
CCGTTTCTAC AACTTGCCGA GGGCGCGATC GGAATGGCTG GCACCGCGAC AGAGCAATGC
GTGGGGCTCG GTAAGCCCGC TTTCACGATC GCGGGACAGG GGCCGCAGTT CACCCGTGGG
TTCGCAGAAG CGCAGACTCG CTTGTTGGGG CAATCGGTGC AGTTACTCTC TCAACCTTCG
GACTTCCTAA CCGCATGGGA GGCTTATCAA GCCGATCTAG CCATGCAAGA AGCGATCGCA
ACCAATGGAC GCTTACGTCT TGGAGAAGCG GGGGCAGCAG CCCGGATTGC CGAGGTCCTG
CGATCGCAGC TGCTAGAGTC AGCGTGA
 
Protein sequence
MRLLCLSNGH GEDQIAIRIL TELRQLEPDW AIAALPLVGE GHAFAAAQIA RIGPRQVLPS 
GGFLNQDWRQ LLRDLAGGLT GLTFGQWQAV RQWSESGSAV LAVGDIVPLL FAWASDRPFA
FVATAKSDYY WRDEQGLLPI SNPTMLWSRW QRSYFDPWDR WLMKHPRCRA VFPRDRLTAE
GLQQLGVPAI AVGNPMMDGL EAPEAAAWSP LLPTGSRWLL LPGSRPPEAQ RNWSQIIDAL
PVDPDRAFVA LAAIAPSLPL AEFTQGLSDR GWQPAASPIP EAIAFQKGAG WCLLGQRNFA
PFLQLAEGAI GMAGTATEQC VGLGKPAFTI AGQGPQFTRG FAEAQTRLLG QSVQLLSQPS
DFLTAWEAYQ ADLAMQEAIA TNGRLRLGEA GAAARIAEVL RSQLLESA