Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_0002 |
Symbol | |
ID | 3774222 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 1262 |
End bp | 2134 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637798407 |
Product | hypothetical protein |
Protein accession | YP_399021 |
Protein GI | 81298813 |
COG category | [S] Function unknown |
COG ID | [COG3881] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.106351 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.0651956 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCAATGT CCGACCAGCC TGAAGAACTG CGGGTTAGCG ACCTTCTCAA TCGACAAGTT CTTGATCGCC AAACCACGGA TGAACATGGC CGCATCGATC GCGTCTGGAT GCATCCGCCA GCCCATCGCG TTTTGGGGTT TCTCTGCAAG CAAGGGCTCA TTCGTGGAGA GTTTTCTGCC TTTCGGCTCG ATCAACTCCA TGCCCTCGGC GATGACAGCG TGGTGTTAGA AGCAGCGCCA CAGCCTGCCA ATCCCGAGAA AGTCGATCGC CTCGAATCAC TCCTCCAACA CGAAGTCTGG ACCGATGCCG GTTTGCATGT CGGCAAAATT GTTGATTGCC GCTTCGATCG TCAGACGGGC TACATCAGCG CCTATCTGGT TAGCCCCCAC GGTTGGCGGG GTGTGGCTGG CATGCTTTGG GATCTCGACC CGCAGCTGGT CTTGAGCTAT GGCCAAGCGC GGGTTTTGGT GGCGGAACTC GATCCAGAAA CGCTGCCGGT CTATGAAGCG GGATTGACGG AAGCGGTTGC TGGTTCCGAA CCGGACTATC GGCATCTGTT GGGCGATCTA CGCCAGCGGG CGCGCCACTG GAAGCAAGAG CTGAAGCTGC AAGTCAGCAA GGTCAAGGAA CAAGCGCAGG AAGTATTAGC GCAAGTCCAA GAAGTGCGGG AGCAAGTCCA GCAGCCCTTG GATTGGGAGG ATGCCACCCC ACAGCCTCTC ACCGCGATCG CAGAGGATGA GGAAGATTGG GATGCGGCGG AGACCGCTTT ACAGCCATTG CCGGAATTGC GCCCTAAATC AGCCGCGATC GCCCCGCCAG CACAGCCCCT GATTCCGCCC GAGGCTTGGG ACGACGACGA CCCGTGGGTC TAA
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Protein sequence | MAMSDQPEEL RVSDLLNRQV LDRQTTDEHG RIDRVWMHPP AHRVLGFLCK QGLIRGEFSA FRLDQLHALG DDSVVLEAAP QPANPEKVDR LESLLQHEVW TDAGLHVGKI VDCRFDRQTG YISAYLVSPH GWRGVAGMLW DLDPQLVLSY GQARVLVAEL DPETLPVYEA GLTEAVAGSE PDYRHLLGDL RQRARHWKQE LKLQVSKVKE QAQEVLAQVQ EVREQVQQPL DWEDATPQPL TAIAEDEEDW DAAETALQPL PELRPKSAAI APPAQPLIPP EAWDDDDPWV
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