Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9902_2229 |
Symbol | |
ID | 3743481 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9902 |
Kingdom | Bacteria |
Replicon accession | NC_007513 |
Strand | + |
Start bp | 2137313 |
End bp | 2138152 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637772428 |
Product | spermidine synthase |
Protein accession | YP_378230 |
Protein GI | 78185796 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0421] Spermidine synthase |
TIGRFAM ID | [TIGR00417] spermidine synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGGCT GGATTGATGA ACACCATCGG GGCGTCCGCT ATGGCCTTAT CGGCGAGGTG CTGGTGGAGG AAACCAGCCC TTTTCAGCGA ATCACTGTGA TCCGAAGTGA GCGCTACGGC CGTGGGCTCT TGCTCGACGG CTGCTGGATG ACGGCGGAAC GGCAAGAGAG GCACTATCAC GAATCCCTGG TTCATCCCGC CCTGTGTGGA GCCACCAGCG TGGCGCGCGT GCTCGTCATC GGCGGCGGTG ATGGGGGTAC CGCCCGTGAA TGCCTCCGCC ACCAAGGCGT CGAACACCTC GACCTCGTGG AAATCGATGG CCGAGTTGTG GAGTTAAGCC GCGAGTACCT CCCCAGCATC GGTGGATCCG CCTGGACCGA TCCGCGTCTC CGACTCACGG TGGGGGATGG AATCGCTTGG GCCGCCGCCG CGGCCGACAA CAGCTACGAC GTGGTGCTTG TGGATGGATC GGACCCGGCA GGCCCAGCGG AGGGATTATT CAATCGATCA TTTTTTGAAC ACTGTCGCCG CATCCTTCGC CCTGGCGGGA TTTTCGCGAC ACAAAGTGAA TCTCCAGAAG CCTTTCAAGA GGTGCACCTC GCCATGGTGA AGCTTTTAAA GGACGTGTTC GACCACGCTG ATCCCCTCTA CGGATGGGTA CCGATGTACC CAAGCGGCTG GTGGAGCTGG ACGTTCGCGG CCATGGACCA ACCTCGCTAC CGCCAACCCA ACACGAACCG AGCCGCTGCG ATCGCCGATG GTTGCCACAT CTGGAGTCCG CGCTGGCAAC GGGGAGCCTT TGAAGCCATC CCAGCCTTCA TCGCACGGGA GCTGAGCTGA
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Protein sequence | MSGWIDEHHR GVRYGLIGEV LVEETSPFQR ITVIRSERYG RGLLLDGCWM TAERQERHYH ESLVHPALCG ATSVARVLVI GGGDGGTARE CLRHQGVEHL DLVEIDGRVV ELSREYLPSI GGSAWTDPRL RLTVGDGIAW AAAAADNSYD VVLVDGSDPA GPAEGLFNRS FFEHCRRILR PGGIFATQSE SPEAFQEVHL AMVKLLKDVF DHADPLYGWV PMYPSGWWSW TFAAMDQPRY RQPNTNRAAA IADGCHIWSP RWQRGAFEAI PAFIARELS
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