Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9902_2124 |
Symbol | prfB |
ID | 3742773 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9902 |
Kingdom | Bacteria |
Replicon accession | NC_007513 |
Strand | + |
Start bp | 2024042 |
End bp | 2025112 |
Gene Length | 1071 bp |
Protein Length | 356 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637772322 |
Product | peptide chain release factor 2 |
Protein accession | YP_378125 |
Protein GI | 78185691 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1186] Protein chain release factor B |
TIGRFAM ID | [TIGR00020] peptide chain release factor 2 |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.66989 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCAGGA CTGTCTTTGA CGTACCTGCA CTGAACGCTA GGCAGCAGGA TCTCGAACAG CTCGCTGCAC AACCAGACTT CTGGAACGAC CAGCAAAACG CCCAAAAACA AATGCGTCGC CTCGATGAGG TGAAGGCCCA ACTACAGCAA TTAGCCGACT GGCGCAGCGC CATTGATGAC GCCAAGGCGA CACTCGAGCT GTATGAGCTT GAGGCGGATG AAGAGATGCT GGGGGAAGCA CAGCAGGGCC TCACGGAACT GCGTCAGGGG CTCGATCGCT GGGAACTCGA ACGGTTGCTC AGCGGTGAGT ACGACAAAGA AGGCGCTGTC CTCAGCATCA ATGCCGGTGC CGGCGGCACC GATGCTCAAG ATTGGGCCCA AATGCTGCTG CGCATGTACA CCCGTTGGGC CGAAGACCAC GACATGAGGG TGACCATCGA CGAAATCAGC GAGGGAGAAG AAGCAGGAAT TAAAAGCGCC ACCATCGAAG TGGAGGGCCG CTACGCCTAT GGCTACCTCC GCAACGAAAA AGGCACCCAT CGATTGGTCC GGATTTCGCC GTTTAACGCC AACGACAAAC GCCAAACCAG CTTCGCCGGC ATTGAAGTGA TGCCAAAACT TGAGGAAGAC GTCGATATCG ACATTCCTGA CAAGGATTTA GAGGTGACCA CATCGCGCTC CGGTGGTGCC GGTGGTCAGA ACGTGAACAA GGTGGAAACA GCCGTTCGTA TCCAACATTT ACCGACTGGC CTGGCCGTGC GGTGCACGCA AGAGCGATCA CAACTGCAGA ACAAAGAAAA AGCCATGGCT CTGCTGAAGG CCAAATTGTT GGTGATCGCC CAAGAGCAAC GGGCCGCTGA AATCGCCGAC ATTCGTGGCG ACATCGTGGA AGCCGCCTGG GGGAACCAGA TCCGTAATTA CGTGTTCCAT CCTTATCAAA TGGTGAAAGA CCTGCGCACT CAGGAGGAAA CCAACGATGT GCAAGCGGTG ATGGATGGCG CACTTGACCC GTTCATCGAC GCCTCTCTGC GGCAGGGTGT CGACCGACCC GGCGACGATG CCGACAACTG A
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Protein sequence | MPRTVFDVPA LNARQQDLEQ LAAQPDFWND QQNAQKQMRR LDEVKAQLQQ LADWRSAIDD AKATLELYEL EADEEMLGEA QQGLTELRQG LDRWELERLL SGEYDKEGAV LSINAGAGGT DAQDWAQMLL RMYTRWAEDH DMRVTIDEIS EGEEAGIKSA TIEVEGRYAY GYLRNEKGTH RLVRISPFNA NDKRQTSFAG IEVMPKLEED VDIDIPDKDL EVTTSRSGGA GGQNVNKVET AVRIQHLPTG LAVRCTQERS QLQNKEKAMA LLKAKLLVIA QEQRAAEIAD IRGDIVEAAW GNQIRNYVFH PYQMVKDLRT QEETNDVQAV MDGALDPFID ASLRQGVDRP GDDADN
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