| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_1884 |
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| Symbol | |
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| ID | 3742942 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9902 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007513 |
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| Strand | + |
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| Start bp | 1808127 |
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| End bp | 1809767 |
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| Gene Length | 1641 bp |
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| Protein Length | 546 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637772079 |
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| Product | phycobilisome linker polypeptide |
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| Protein accession | YP_377885 |
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| Protein GI | 78185450 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.339596 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACACAA CTCAAGCTTC AAAAGGATTC GGCGCAGAAA CCAAATGGAG CAGCCCCGTC
AGCTTTGAGC GCAAAGGAGT CAGCAAAAAA CCTGCTCTCA CAATTGGTGA GTTCCTCAAG
CAGTCATGCG ATCAACTGGC GATCGGGGTT GGACCTCGCA GTCATGCCGA TTGCCCTCAC
CGCGTCACCG CAGAGTGCTA CAGCCCAGAC GACTCGGCAT CGCTGAGTGA CGTCATCTCT
GCCGCATACC GACAAGTCTT TGGTAATGCC CATGTGATGG ATTTCGAACG TTGCGCCGAG
CTTGAAGCTC AACTGCGCAA TGGAGACATC GACGTTCGCA ATTTTATTCG CGGACTTGCC
AAATCAAGCT TTTACAAAAG CCGCTTTTTC TTATCCGTTG CCCCTCAACG CGGCATTGAG
CTGAACTTCA AACACCTGCT AGGGCGCGCA CCGCACTCCC AAGCAGAAAT GTCAGCAAAG
ATCTCCCTGC AAGCAGAGCA CGGGCAAGCA GCTGTGATCG ACAGCATCGT CGATTCGGCC
GAATACCTCG AAGTCTTTGG GAGCAACGTG GTTCCCTATG CACGTTCATG GAGCTCCCCC
GCAGATCTCT CAACAGCGGC ATTCCCCATG CTGGCCGCTC TGGAGAAAAG CTTTGCGGGA
AGCGACAGTG CGCGCGGCGG TAGCAGCTCA CTCACGACAA GCCTGGGCCG TGGCATGGCT
CCCCGGATCA GCGTCCCGTC ACAACCATTT GGCGTCCGCC CATCTGCAGG GGGCGGTGCT
CGCTTCGCAA GCAAAGCACC TGGCGTGACC AGCGGGAAAG ACAATGCACC GATGAGGGGC
GATTCCTACG TGTTCTTCGG CCTAGGCCAG CGCGAACAAG AAACCTACCA ACGCTGCCCC
GGCGACAGCC CCGATCAACT CGCAGCATTG ATTCGCGCGT CTTACAAACA AGTGATGGGC
AACCCCCATC TGATGGAATT TGAGCGTGCC ATCTCAGCGG AAAGCAAATT CATCGACGGC
TACTTGAGCA CCCGTGAATT TGTCCGTGCC ATTGGACTGT CGGCTGAATA CAAGCGCCGT
TTCTTCGAAA CGAACGCTCC ATATCGCTTC ATCGAGTTGA ACTTCAAGCA CTTCCTCGGT
CGGGCTCCGA AGTCCCAAGC TGAAATCAGT CTGCACACCA AAATCCTGGC CGAAGGTGGC
TACGACGCAG AAATCGCAAG CTACGTCGAT TGCGAGGAAT ACCAGAGCAC CTTCGGGGAA
GACACCGTTC CATTCGCCCG GATCCTGTCT GAAAACGGAC GCTCTCAAGT GGCCTTCAAC
CGTCACCTGA AACTGGCTGA AGGCTTCGCT GCTAGCGACA CCGTTCAAAC CAGTTCTTCC
CTCGTAACGT CCGTGGCAAC TGGAACGGTT CCTGGAGGCT GGAGTTCCAC AACCACACGG
ATTAACCGGA CTGGTACACA GTCTGGTGCG CCCGATCCCA CCAAGAAGCG TTTCCGGATT
GTGGTTGGTG CTCAAGCAGC CCGTGGACGC CAACGCACTG CAGGGAACAC GTATTTGGTA
TCCGGCAAAG ACATGTCGAG CCAGATGAAA TACATCCATG CCCGTGGCGG CAAGATTGTT
TCCATCACTG AAGTGATGTA A
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| Protein sequence | MDTTQASKGF GAETKWSSPV SFERKGVSKK PALTIGEFLK QSCDQLAIGV GPRSHADCPH
RVTAECYSPD DSASLSDVIS AAYRQVFGNA HVMDFERCAE LEAQLRNGDI DVRNFIRGLA
KSSFYKSRFF LSVAPQRGIE LNFKHLLGRA PHSQAEMSAK ISLQAEHGQA AVIDSIVDSA
EYLEVFGSNV VPYARSWSSP ADLSTAAFPM LAALEKSFAG SDSARGGSSS LTTSLGRGMA
PRISVPSQPF GVRPSAGGGA RFASKAPGVT SGKDNAPMRG DSYVFFGLGQ REQETYQRCP
GDSPDQLAAL IRASYKQVMG NPHLMEFERA ISAESKFIDG YLSTREFVRA IGLSAEYKRR
FFETNAPYRF IELNFKHFLG RAPKSQAEIS LHTKILAEGG YDAEIASYVD CEEYQSTFGE
DTVPFARILS ENGRSQVAFN RHLKLAEGFA ASDTVQTSSS LVTSVATGTV PGGWSSTTTR
INRTGTQSGA PDPTKKRFRI VVGAQAARGR QRTAGNTYLV SGKDMSSQMK YIHARGGKIV
SITEVM
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