Gene Syncc9902_1878 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_1878 
Symbol 
ID3742936 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand+ 
Start bp1803531 
End bp1804175 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content45% 
IMG OID637772073 
Producthypothetical protein 
Protein accessionYP_377879 
Protein GI78185444 
COG category[S] Function unknown 
COG ID[COG0398] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.826687 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAAGGA TAAAGACCGG GATAAAAATA GCCTTGATCA CTATATTATT GATTCTAATA 
GTATATTATC TACAAAAATA TGGGATTGAG CCCCTTAAAG AAGCAGTGCA GAGTATGGGC 
ATTTGGGCCC CACTCGGAAT AGCACTTCTT CGCGGGATTA GCATCGTTTT ACCGGCATTA 
CCCAGCTCGG TTTATTCCTT ACTCGCCGGC TCATTACTGG GATTTGAAAC TGGCTACCTA 
ACTATTATTT TTGCCGATCT TGTGTTTTGC AACGCAGCAT TTTTTATTGC GAGAATTTGG 
GGACGTTCTC CCGTAAGTCG CCTGGTAGGC CACAAGGCTA TGGAGCGGAT TGATGGGTTC 
AGCCAGAATC AACTGGAAGG GAATTTCTTT CTCATGACAG GCCTATTAAT GACTGGCTTG 
TTTGATTTTT TAAGTTATGC GATTGGCATC AGCCAAACCC GTTGGAGAAT TTTTGCTCCA 
GCCCTTGTGA TCAGCGTATT AATCAGTGAC TCAATCCTAG TTGCCGTCGG TGCTGGGGTT 
ACACAGGGAG CAAGCGTGAT GCTGGGCATT GCCTTGCTTG CCATGTTTGC CTTGGCAACA 
CTCACGGGAT TACTAAAGAA GAAATCAGTC GAAACAAACG ATTGA
 
Protein sequence
MPRIKTGIKI ALITILLILI VYYLQKYGIE PLKEAVQSMG IWAPLGIALL RGISIVLPAL 
PSSVYSLLAG SLLGFETGYL TIIFADLVFC NAAFFIARIW GRSPVSRLVG HKAMERIDGF 
SQNQLEGNFF LMTGLLMTGL FDFLSYAIGI SQTRWRIFAP ALVISVLISD SILVAVGAGV 
TQGASVMLGI ALLAMFALAT LTGLLKKKSV ETND