| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_1837 |
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| Symbol | |
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| ID | 3742130 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9902 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007513 |
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| Strand | - |
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| Start bp | 1763011 |
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| End bp | 1764684 |
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| Gene Length | 1674 bp |
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| Protein Length | 557 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637772029 |
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| Product | alpha amylase domain-containing protein |
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| Protein accession | YP_377838 |
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| Protein GI | 78185403 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | [TIGR02456] trehalose synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCACAG GGCGGCCATG GTGGTCAGGA ACGGTTGTTT ATCAACTGAT CGTTCGCAGC
TACTCCGACG GGAACGGTGA TGGCATCGGT GATTTCAAAG GTTTGGCAGC GCGTTTGCCT
TACCTGCGAT GGCTTGGGGT GAAAACCCTA TGGCTGACGC CTATCTATCC ATCCCCACTG
CGGGATGGCG GATATGACAT CACTGATTTC AAAGGGATTC ATCCAGATCT TGGCGATCTG
GCTTCGTTTC ATCGCTTTTT GACAGCAGCC CACAGCCAGG GCATGCGGGT GATTCTCGAC
TTGGTTTTGA ACCACACCAG TGACTTGCAC CCTTGGTTCC AGCGGGCCCG ATGGGCTCCA
AAAGGAAGTC CGGAGCGTGG TGTTTACGTC TGGAGTGATG ACCCCAAGCA GTACAGCGAT
GCGCCTGTGC TGTTTCGACA CTTCGAATCA TCGAACTGGG AATGGGATTC CGTTGCGGAG
CAGTACTACC TGCATCGCTT TCTCCGTCAT CAGCCTGATC TCAACTACGA AAATCCCTGG
GTCCAGGAGG CGATGTTGGA CGTCGTCGAT TTCTGGCTGG AGAGGGGGGT GGATGGCTTT
CGCCTCGACG CCGTTCCGTT TTTGTTCGAA GCAGAAGGAA CCCGTTGCGA AGGGCTGCCA
GAAACCCATG CGTTCCTCAA GCGCTTGCGG AAGCGCGTTG ATGCCCATGG CCGCGATGTG
TTGCTGCTCG GTGAGGCGAT TCAACCCGTT GATGAGGCGG CGCCTTATCT CGCGGACGAT
GAGCTTCAGG GCGCCTTCAA TTTTGTGTTG ACAGCCCATC TGTTTGCAGC AATCGCCAGT
GGCACGGCCC AAAAGTTGGG CGAGTGTTTA CTGGAAGCGG AGCAGGCCGT GGAAGGCCCT
CGATGGGCGC TGCCGTTGCG CAATCACGAT GAGCTTTGGC TTGGTGATGG ACACCTCATT
GACGATGAGG TGATTCAAGC GGTGCGGTTT GGTTTACCCC AGGGCCAGGG CCATTGGTTG
AACTGGGGAA TTAACCGTCG ACTGGCTCCG TTGCTCAACG GTGATCCCCG CTCCAACCGC
CTTCTGCACG GTTTGCTGTA CAGCTTGCCC GGGATGCCTT GCCTGTATTA CGGCGATGAG
CTGGGAATGG GGGATTGGCC TGGCTTGAGG GACCGTGATC CCAACCGAAC TCCGATGGCT
TGGACCCCAG CCCGTAATGG AGGTTTTTCC ATGGCCCCAG ATCCATTGCT GGTGCTGCCT
CCCATCACGG CGGCTGGCTA CGACTACCGC GTGGTGAATG TGGAAGTGCA AAAGCAGTTG
CCGGGTTCAT TGCTGAATTG GCATCGGCGG ATGCTGACCT CCCGTCGGTT GCTGCCAGCA
CTGCAGCATG GCGATTTCAC CCTGCTCCCC AGCAGTCATC CAGGTGTTTT GGTGTATTTG
CGATCCACAG ACGAGATGTC TGTTTTGGTG GCGGCGAATG TGACCGCTGC GGGAGCGTCA
TTGAGCTTGG ATTTATCGGC GTGGAAAGGA CAACGCACGC GTGAAGTGAT GTGGGGGTGT
GAATTCCCCA CCGCCAACGA GGAGTGGTTT GTGAATTTGC CGCCCTACGG ATTCAACTGG
TGGCTCATTG GTGAGGTGGA AGTGGCCGTG GAGGCTGATA CAAGGCCGGA TTGA
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| Protein sequence | MTTGRPWWSG TVVYQLIVRS YSDGNGDGIG DFKGLAARLP YLRWLGVKTL WLTPIYPSPL
RDGGYDITDF KGIHPDLGDL ASFHRFLTAA HSQGMRVILD LVLNHTSDLH PWFQRARWAP
KGSPERGVYV WSDDPKQYSD APVLFRHFES SNWEWDSVAE QYYLHRFLRH QPDLNYENPW
VQEAMLDVVD FWLERGVDGF RLDAVPFLFE AEGTRCEGLP ETHAFLKRLR KRVDAHGRDV
LLLGEAIQPV DEAAPYLADD ELQGAFNFVL TAHLFAAIAS GTAQKLGECL LEAEQAVEGP
RWALPLRNHD ELWLGDGHLI DDEVIQAVRF GLPQGQGHWL NWGINRRLAP LLNGDPRSNR
LLHGLLYSLP GMPCLYYGDE LGMGDWPGLR DRDPNRTPMA WTPARNGGFS MAPDPLLVLP
PITAAGYDYR VVNVEVQKQL PGSLLNWHRR MLTSRRLLPA LQHGDFTLLP SSHPGVLVYL
RSTDEMSVLV AANVTAAGAS LSLDLSAWKG QRTREVMWGC EFPTANEEWF VNLPPYGFNW
WLIGEVEVAV EADTRPD
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