Gene Syncc9902_1833 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_1833 
Symbol 
ID3742930 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand- 
Start bp1757803 
End bp1758243 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content54% 
IMG OID637772025 
Product3-dehydroquinate dehydratase 
Protein accessionYP_377834 
Protein GI78185399 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0757] 3-dehydroquinate dehydratase II 
TIGRFAM ID[TIGR01088] 3-dehydroquinate dehydratase, type II 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.120538 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACGTTC TGCTCCTTAA TGGTCCAAAT CTCAATTTGC TTGGGCAGCG GGAGCCTGGG 
ATTTATGGCT GCGACACCTT GGCGACGATT GAAACGGAGC TCACTCGAGA GGCCAAAGCT 
GATGGTGTTG AGTTGGTGTG CTTTCAAAGC AACTTCGAAG GAGCTTTGAT TGAGCGCATC 
CATCAGGCCA TGGGAGAGAG CCAGGGGATT TTGATTAATG CCGGTGCTTA CACCCATTCA 
TCGATTGCGA TTCGGGATGC CTTAACCGGT GTGGCCATTC CCTATGTGGA GTTACACCTC 
AGCAACACCC ATGCTCGCGA GCCTTTTCGC CATCAGTCGT ACCTTGCAGG CCGTGCCGTT 
GGAGTGGTGA GTGGATTCGG CGCCAAGAGT TATTCATTGG CTCTGAGCGG ATTGGTCCAT 
CACTTGCGAC AGGGCGGATG A
 
Protein sequence
MHVLLLNGPN LNLLGQREPG IYGCDTLATI ETELTREAKA DGVELVCFQS NFEGALIERI 
HQAMGESQGI LINAGAYTHS SIAIRDALTG VAIPYVELHL SNTHAREPFR HQSYLAGRAV 
GVVSGFGAKS YSLALSGLVH HLRQGG