| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_1774 |
|---|
| Symbol | |
|---|
| ID | 3743414 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9902 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007513 |
|---|
| Strand | - |
|---|
| Start bp | 1705253 |
|---|
| End bp | 1706443 |
|---|
| Gene Length | 1191 bp |
|---|
| Protein Length | 396 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637771965 |
|---|
| Product | aminotransferase |
|---|
| Protein accession | YP_377775 |
|---|
| Protein GI | 78185340 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.472622 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCAATCT CTAAACGGTT AAGTGCACTT GGCAGTGGTG TCTTCGCTCG AAGCGATGCT
GCCAAGCAGA CGTACAGAGA GACAACCTCA CAGAGGGGCG GCCCAGCTCT GGTTGATCTT
TCCATTGGAT CTTCCGATCT CGCTCCACCA AAAGAGGTAC TGCAGTCGAT AGCCACAGCT
GTTCTTCAGC CCTCCAGTAC GAGTTACTGC CTGCAGGCAG GGGTCAAGCC CTTTCATCGA
GCTGTTGCTG ATTGGTGCCG GCAGCGTTTT GGAGTTGTCG TCGACCCCGA CAGAGAAGTT
CAACTCCTCG TGGGTTCTCA GGAAGGCACG GCTCATCTTC CTCTTGCCGT TCTGGACCAT
GGAGATGCGG CCCTGCATCT TGATCCCTGT TATCCATCGC ATTCAGGGGG ACTTCACCTG
GCGGGTGCGG CGGTTCAGAA GCTTCCTCTC TCACAGGAAC ACAACTGGCG ACCAGATTTG
CAACGCATTC GAGCGTCGCA GTGGGATCAG TTGAAGTTGT TTGTGCTTGG TTATCCCCAC
AATCCAACCG CTCGCGTGGG CGATCAAGAG GATTTGAATC GAATCATGGG GTTGGGGACG
CGGCATCAGC TCGTGATTGC TCACGACAAT CCCTATGTGG ATCTTGCCCT CGACGGCGTG
GCTCCGACCT TGTTGCAGGC CAGCGGATGG AGGGACTGGG GCATTGAATT CTTCTCCTTG
TCGAAGGGGT GGTGCCTCGG CGGTTTTCGT CTCGGTTTTG CCGTCGGAGC GGCACCGCTC
ATTGCAGCGT TACGGCAAAC AAAGGCCGTC ATTGATTTCA ATCAGTCGCT CGCCTTGCAG
CAGGGAGGAA TTCAGGCTTT GCAAGAGTTT GCGCATTGGC CAGCACAGTT GCATCCAATT
TTTCGGGAGC GTCGGGATCG TGTTGTGGAT TCGCTCTCCA ATCGGGGTTG GAACGTCGCC
ACTCCAGATA TGGCCATGTA TCTCTGGATG CCTTTGCCTG CTGCGGCCCT GGCCCGCGGT
TGGTCTGATG AACAAACTGC GTCGGAATTA CTGCAGCGCA GTGGTGTTGC CCTAACTCCA
GGGTCTGGTT TTGGCACCGC GGGTCGCGAT TGGTTGCGGA TGGCATTGGT GCGACCCGTT
GAGGAACTCG AACTGGCGGC CCAGCGACTG ATGGATGCTT TGGATGAGTG A
|
|---|
| Protein sequence | MPISKRLSAL GSGVFARSDA AKQTYRETTS QRGGPALVDL SIGSSDLAPP KEVLQSIATA
VLQPSSTSYC LQAGVKPFHR AVADWCRQRF GVVVDPDREV QLLVGSQEGT AHLPLAVLDH
GDAALHLDPC YPSHSGGLHL AGAAVQKLPL SQEHNWRPDL QRIRASQWDQ LKLFVLGYPH
NPTARVGDQE DLNRIMGLGT RHQLVIAHDN PYVDLALDGV APTLLQASGW RDWGIEFFSL
SKGWCLGGFR LGFAVGAAPL IAALRQTKAV IDFNQSLALQ QGGIQALQEF AHWPAQLHPI
FRERRDRVVD SLSNRGWNVA TPDMAMYLWM PLPAAALARG WSDEQTASEL LQRSGVALTP
GSGFGTAGRD WLRMALVRPV EELELAAQRL MDALDE
|
|---|
| |